CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d016697_P001	Maize	extracellular	88.56	89.32
Os02t0532500-01	Rice	extracellular	79.66	82.1
TraesCS6D01G033100.1	Wheat	golgi	78.39	81.14
TraesCS6B01G041100.1	Wheat	extracellular	77.97	80.7
TraesCS6A01G028700.1	Wheat	extracellular, unclear	77.12	79.82
HORVU6Hr1G005420.1	Barley	extracellular	77.12	79.82
KRG90715	Soybean	nucleus	48.31	54.55
PGSC0003DMT400061586	Potato	extracellular	47.88	53.3
KRH36030	Soybean	extracellular	41.1	52.43
Solyc11g006980.1.1	Tomato	extracellular	47.03	52.36
VIT_08s0007g03430.t01	Wine grape	cytosol	44.92	52.22
Bra034093.1-P	Field mustard	extracellular	47.46	49.56
KRH30838	Soybean	extracellular	47.46	49.56
CDY22215	Canola	extracellular	47.46	49.56
CDY41321	Canola	extracellular	47.46	49.56
KRH32736	Soybean	extracellular, vacuole	47.03	49.12
EES04228	Sorghum	extracellular	39.83	41.78
EES02060	Sorghum	extracellular	39.41	41.52
EES02802	Sorghum	extracellular	36.86	39.73
EES02420	Sorghum	extracellular	37.71	39.38
EER95948	Sorghum	extracellular	37.29	38.1
EES02061	Sorghum	extracellular	38.14	37.82
AT3G10080.2	Thale cress	mitochondrion	47.03	37.25
EER93258	Sorghum	endoplasmic reticulum, extracellular	34.75	35.19
EER91050	Sorghum	extracellular	32.63	34.22
EES15104	Sorghum	endoplasmic reticulum, extracellular, vacuole	30.51	33.03
EES01342	Sorghum	extracellular, vacuole	30.08	32.13
EER95401	Sorghum	vacuole	32.63	31.95
EES17780	Sorghum	extracellular, vacuole	29.66	31.67
EES15103	Sorghum	extracellular	28.39	30.45
KXG32174	Sorghum	plastid	38.14	28.48

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:8058641	UniProt:C5XTE7	InterPro:Cupin_1	EnsemblPlants:EES06908
ProteinID:EES06908	ProteinID:EES06908.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872
InterPro:Germin	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325	PANTHER:PTHR31238	PANTHER:PTHR31238:SF8
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	EnsemblPlantsGene:SORBI_3004G165300	SUPFAM:SSF51182	unigene:Sbi.8422
SignalP:SignalP-noTM	UniParc:UPI0001A85BB9	RefSeq:XP_002453932.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr4:-:51497381..51498537

Molecular Weight (calculated)

24764.6 Da

IEP (calculated)

5.679

GRAVY (calculated)

0.063

Length

236 amino acids

Sequence
(BLAST)

001: MAPRDLLLLL LAAVLLPSSS TAADPDAVQD YCVPETGAGA RDRAVPVDLS LLPSYPCRSP ANLTAADFAS AAVRAAGNFS ADTGFAGVSV TPATFPALHT
101: LGMSFARADL SAAGGVNPPH YHPRATETAL VLSGRVYAGF VDTGGRVFAK VLEKGEVMVF PRAMVHFQMN VGDEPATVYG SFNSENPGIV RIPATVFGSG
201: IKEGVLERAF GLSPEELRRL EKRFGPPKTK TAEMDD

Best Arabidopsis Sequence Match ( AT3G10080.2 )
(BLAST)

001: MYRPNHSHNQ NHISKRGFSF GTKTHTLISQ TKFWLIKSNH LNQSLIYPHQ IYICLFKPDV TQLFFTWTSS KMEANTLFLL KALCLLCFNV CFTLASDPDP
101: IQDFCIPKPV TSPYHDHHFS TNLPCKNSSE VTTEDFVFSG LKTAGNFTET GFATVPVGPE NFPGLNTLGI SFVRADLKPG SINPPHYHPR ATEVAHLVKG
201: RVYSGFVDSN NKVYAKVMEE GEMMVYPKGL VHFQMNVGDV TATIVGGLNS QNPGIQKIPS VVFGSGINEE LLMKAFGLSL KQIGTLKKRF DPVMSNEH

Arabidopsis Description

RmlC-like cupins superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI8]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.