Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 5
- golgi 5
- nucleus 1
- mitochondrion 1
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plasma membrane:
27800704
extracellular: 28232208 |
msms PMID:
27800704
doi
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
msms PMID:
28232208
doi
Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS6A01G028700.1 | Wheat | extracellular, unclear | 86.46 | 86.84 |
TraesCS6D01G033100.1 | Wheat | golgi | 86.03 | 86.4 |
TraesCS6B01G041100.1 | Wheat | extracellular | 86.03 | 86.4 |
HORVU6Hr1G005420.1 | Barley | extracellular | 85.15 | 85.53 |
Zm00001d016697_P001 | Maize | extracellular | 85.15 | 83.33 |
EES06908 | Sorghum | extracellular, vacuole | 82.1 | 79.66 |
VIT_08s0007g03430.t01 | Wine grape | cytosol | 47.6 | 53.69 |
KRG90715 | Soybean | nucleus | 48.47 | 53.11 |
PGSC0003DMT400061586 | Potato | extracellular | 47.6 | 51.42 |
Solyc11g006980.1.1 | Tomato | extracellular | 46.72 | 50.47 |
KRH36030 | Soybean | extracellular | 40.61 | 50.27 |
CDY22215 | Canola | extracellular | 48.91 | 49.56 |
KRH30838 | Soybean | extracellular | 48.91 | 49.56 |
KRH32736 | Soybean | extracellular, vacuole | 48.91 | 49.56 |
Bra034093.1-P | Field mustard | extracellular | 48.47 | 49.12 |
CDY41321 | Canola | extracellular | 48.47 | 49.12 |
Os01t0249200-01 | Rice | extracellular | 40.61 | 40.97 |
Os01t0284500-01 | Rice | extracellular | 37.99 | 40.28 |
Os03t0804700-00 | Rice | plastid | 39.3 | 40.0 |
Os05t0277500-01 | Rice | extracellular | 38.43 | 39.82 |
Os03t0651800-00 | Rice | extracellular | 37.99 | 39.19 |
Os01t0952000-02 | Rice | extracellular | 37.55 | 38.56 |
AT3G10080.2 | Thale cress | mitochondrion | 49.78 | 38.26 |
Os03t0693700-01 | Rice | extracellular, plasma membrane, vacuole | 36.68 | 37.0 |
Os01t0952100-00 | Rice | extracellular | 37.55 | 36.6 |
Os03t0179100-00 | Rice | extracellular, vacuole | 35.37 | 36.0 |
Os03t0694000-01 | Rice | extracellular | 35.37 | 35.37 |
Os03t0693800-00 | Rice | extracellular | 35.37 | 35.37 |
Os01t0705100-00 | Rice | extracellular | 33.62 | 34.38 |
Os03t0693900-00 | Rice | extracellular | 34.06 | 34.36 |
Os08t0460000-01 | Rice | extracellular | 31.88 | 34.27 |
Os03t0804500-01 | Rice | extracellular | 32.75 | 32.19 |
Os08t0459700-00 | Rice | extracellular | 29.26 | 30.59 |
Os04t0288100-00 | Rice | mitochondrion | 24.02 | 22.18 |
Protein Annotations
Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:4329551 | EMBL:AK059817 | ProteinID:BAD28420.1 | ProteinID:BAF08939.1 |
ProteinID:BAS79042.1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 |
GO:GO:0005618 | GO:GO:0005623 | GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 | GO:GO:0046872 |
GO:GO:0048046 | InterPro:Germin | InterPro:IPR014710 | EnsemblPlantsGene:Os02g0532500 | EnsemblPlants:Os02t0532500-01 | PFAM:PF00190 |
PRINTS:PR00325 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF8 | UniProt:Q6ESF0 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI00003CE6D1 | RefSeq:XP_015622959.1 | SEG:seg |
Description
GERMIN-LIKE PROTEIN 2-4Germin-like protein, Fungal blast and bacterial blight resistance (Os02t0532500-01)
Coordinates
chr2:-:19597550..19598541
Molecular Weight (calculated)
24319.4 Da
IEP (calculated)
8.495
GRAVY (calculated)
0.073
Length
229 amino acids
Sequence
(BLAST)
(BLAST)
001: MAHRRRCLLL LLAVLLPAMA ARGDPDAVQD FCVPDAGRGR PVELAMLPAY PCRSPANLTA GDFAFSGVRA AGNFSPETGF AGVSVTPAQF PGLHTLGMSF
101: ARADLSAAGG VNPPHYHPRA TETALVLAGR VYAGFVDSGG RLFAKVLEQG EVMVFPRAMV HFQLNVGDTP ATVYGAFNSE NPGIVRIPAT VFGSGIREAV
201: LERAFGLTPA ELRRLEKRFG PPKKAEMED
101: ARADLSAAGG VNPPHYHPRA TETALVLAGR VYAGFVDSGG RLFAKVLEQG EVMVFPRAMV HFQLNVGDTP ATVYGAFNSE NPGIVRIPAT VFGSGIREAV
201: LERAFGLTPA ELRRLEKRFG PPKKAEMED
001: MYRPNHSHNQ NHISKRGFSF GTKTHTLISQ TKFWLIKSNH LNQSLIYPHQ IYICLFKPDV TQLFFTWTSS KMEANTLFLL KALCLLCFNV CFTLASDPDP
101: IQDFCIPKPV TSPYHDHHFS TNLPCKNSSE VTTEDFVFSG LKTAGNFTET GFATVPVGPE NFPGLNTLGI SFVRADLKPG SINPPHYHPR ATEVAHLVKG
201: RVYSGFVDSN NKVYAKVMEE GEMMVYPKGL VHFQMNVGDV TATIVGGLNS QNPGIQKIPS VVFGSGINEE LLMKAFGLSL KQIGTLKKRF DPVMSNEH
101: IQDFCIPKPV TSPYHDHHFS TNLPCKNSSE VTTEDFVFSG LKTAGNFTET GFATVPVGPE NFPGLNTLGI SFVRADLKPG SINPPHYHPR ATEVAHLVKG
201: RVYSGFVDSN NKVYAKVMEE GEMMVYPKGL VHFQMNVGDV TATIVGGLNS QNPGIQKIPS VVFGSGINEE LLMKAFGLSL KQIGTLKKRF DPVMSNEH
Arabidopsis Description
RmlC-like cupins superfamily protein [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSI8]
SUBAcon: [mitochondrion]
SUBAcon: [mitochondrion]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.