Factsheet for Os04t0288100-00

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
vacuole 1
mitochondrion 4
extracellular 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES15104	Sorghum	endoplasmic reticulum, extracellular, vacuole	47.98	54.59
TraesCS2B01G616500.1	Wheat	extracellular	45.56	52.07
HORVU0Hr1G023590.1	Barley	extracellular, vacuole	44.35	49.77
TraesCS2D01G566700.1	Wheat	extracellular	42.34	49.3
HORVU6Hr1G066380.1	Barley	extracellular, vacuole	44.35	49.11
HORVU2Hr1G127660.1	Barley	cytosol	42.34	49.07
HORVU2Hr1G127670.1	Barley	extracellular, vacuole	43.15	48.2
Os08t0460000-01	Rice	extracellular	37.9	44.13
Os08t0459700-00	Rice	extracellular	38.71	43.84
KRH47602	Soybean	extracellular, vacuole	33.06	39.42
KRH47606	Soybean	extracellular, vacuole	33.06	39.42
KRH47601	Soybean	endoplasmic reticulum	32.66	38.94
KRH06188	Soybean	extracellular	28.23	38.67
KRH47603	Soybean	extracellular, vacuole	32.26	35.56
KRH06189	Soybean	endoplasmic reticulum, extracellular, vacuole	29.03	34.95
KRH07140	Soybean	extracellular, vacuole	29.03	34.29
KRH07141	Soybean	cytosol	27.42	33.66
KRH07144	Soybean	extracellular, vacuole	28.63	33.33
TraesCSU01G137500.1	Wheat	extracellular, plasma membrane, vacuole	35.08	31.41
Os05t0277500-01	Rice	extracellular	27.82	31.22
Os01t0284500-01	Rice	extracellular	26.61	30.56
Os03t0651800-00	Rice	extracellular	26.21	29.28
Os01t0952000-02	Rice	extracellular	26.21	29.15
Os01t0952100-00	Rice	extracellular	27.02	28.51
Os03t0804700-00	Rice	plastid	25.81	28.44
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	25.81	28.19
Os01t0249200-01	Rice	extracellular	25.81	28.19
Os03t0694000-01	Rice	extracellular	25.4	27.51
Os03t0804500-01	Rice	extracellular	25.81	27.47
Os01t0705100-00	Rice	extracellular	24.6	27.23
Os03t0693800-00	Rice	extracellular	25.0	27.07
Os03t0693900-00	Rice	extracellular	24.19	26.43
Os02t0532500-01	Rice	extracellular	22.18	24.02
Os03t0179100-00	Rice	extracellular, vacuole	21.37	23.56
KRH47605	Soybean	extracellular	8.47	19.63

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A0P0W8K1	ProteinID:BAS88404.1	InterPro:Cupin_1	GO:GO:0003674
GO:GO:0003676	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0008270	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:Germin_Mn-BS	InterPro:IPR014710	EnsemblPlantsGene:Os04g0288100	EnsemblPlants:Os04t0288100-00	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF35	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	UniParc:UPI000393BB5D	SEG:seg	:	:	:

Description

Similar to Auxin-binding protein ABP20. (Os04t0288100-00)

Coordinates

chr4:-:12504047..12505046

Molecular Weight (calculated)

27042.6 Da

IEP (calculated)

11.197

GRAVY (calculated)

-0.244

Length

248 amino acids

Sequence
(BLAST)

001: MTTFKIERRE YWFRRSSVGT LHSLISTTLD TAYNGIACSQ VTNHGQRHAA APALALPDHV LRLPGPEPGL LRRRPGPRRH AGRLPVQARG HRHRRRLLLP
101: RPMQTRFPGV NGLDISAARV DFSPGGIVPL HSHPSGTELI YVVEGTLSAG FISSTSNKVY TSTLRKGDLM VFPQGLLHFQ INDNGGGGDG NNATAAMAVS
201: FYSSSNPGLQ IMDFALFANN LPTDVLSKVT VLDDLEIRKL KSLFRGTG

Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)

001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG

Arabidopsis Description

GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.