Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum
Predictor Summary:
Predictor Summary:
- extracellular 7
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 5
- golgi 5
- plastid 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
extracellular:
22945350
endoplasmic reticulum: 27224218 nucleus: 27291164 endoplasmic reticulum: 28499913 nucleus: 28499913 |
msms PMID:
22945350
doi
Key Laboratory of Plant-Soil Interactions, Ministry of Education, Center for Resources, Environment and Food Security, China Agricultural University, Beijing, China.
msms PMID:
28499913
doi
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH47602 | Soybean | extracellular, vacuole | 84.62 | 84.62 |
| KRH47606 | Soybean | extracellular, vacuole | 84.62 | 84.62 |
| KRH06188 | Soybean | extracellular | 68.27 | 78.45 |
| KRH47603 | Soybean | extracellular, vacuole | 83.65 | 77.33 |
| KRH47605 | Soybean | extracellular | 30.77 | 59.81 |
| KRH06186 | Soybean | extracellular, vacuole | 59.62 | 59.33 |
| KRH47600 | Soybean | extracellular | 59.13 | 58.85 |
| KRH12528 | Soybean | extracellular | 60.1 | 58.69 |
| KRH02617 | Soybean | nucleus | 58.65 | 58.65 |
| KRH06189 | Soybean | endoplasmic reticulum, extracellular, vacuole | 57.69 | 58.25 |
| KRH07140 | Soybean | extracellular, vacuole | 56.25 | 55.71 |
| KRH07144 | Soybean | extracellular, vacuole | 56.73 | 55.4 |
| KRH07141 | Soybean | cytosol | 49.52 | 50.99 |
| EES15104 | Sorghum | endoplasmic reticulum, extracellular, vacuole | 53.37 | 50.92 |
| KRH19305 | Soybean | cytosol, extracellular, plastid | 50.0 | 47.93 |
| TraesCS2B01G616500.1 | Wheat | extracellular | 49.52 | 47.47 |
| Zm00001d032047_P001 | Maize | cytosol | 43.27 | 46.63 |
| Os08t0459700-00 | Rice | extracellular | 48.08 | 45.66 |
| HORVU0Hr1G023590.1 | Barley | extracellular, vacuole | 47.6 | 44.8 |
| HORVU6Hr1G066380.1 | Barley | extracellular, vacuole | 47.6 | 44.2 |
| HORVU2Hr1G127670.1 | Barley | extracellular, vacuole | 46.63 | 43.69 |
| TraesCS2D01G566700.1 | Wheat | extracellular | 44.71 | 43.66 |
| EES15103 | Sorghum | extracellular | 46.15 | 43.64 |
| HORVU2Hr1G127660.1 | Barley | cytosol | 44.71 | 43.46 |
| Zm00001d032048_P001 | Maize | cytosol | 24.52 | 39.53 |
| KRH33715 | Soybean | nucleus | 37.5 | 34.98 |
| KRG90420 | Soybean | extracellular, nucleus | 37.02 | 34.38 |
| KRG96655 | Soybean | extracellular, vacuole | 35.58 | 33.79 |
| KRH74710 | Soybean | extracellular | 35.58 | 33.64 |
| KRH68383 | Soybean | nucleus | 35.1 | 33.49 |
| KRH69437 | Soybean | extracellular | 35.1 | 33.18 |
| KRG90715 | Soybean | nucleus | 33.17 | 33.01 |
| Os04t0288100-00 | Rice | mitochondrion | 38.94 | 32.66 |
| KRG96631 | Soybean | extracellular, vacuole | 28.85 | 32.61 |
| KRH33688 | Soybean | extracellular | 34.13 | 32.27 |
| KRH36030 | Soybean | extracellular | 28.37 | 31.89 |
| KRH33687 | Soybean | extracellular | 33.65 | 31.67 |
| KRH30838 | Soybean | extracellular | 32.69 | 30.09 |
| TraesCSU01G137500.1 | Wheat | extracellular, plasma membrane, vacuole | 39.42 | 29.6 |
| KRH69151 | Soybean | cytosol | 21.63 | 29.41 |
| KRH32736 | Soybean | extracellular, vacuole | 31.73 | 29.2 |
Protein Annotations
| EntrezGene:100813853 | Gene3D:2.60.120.10 | MapMan:35.1 | EMBL:ACUP02004155 | InterPro:Cupin_1 | EnsemblPlantsGene:GLYMA_07G038600 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 | GO:GO:0046872 | InterPro:Germin | InterPro:Germin_Mn-BS |
| UniProt:I1KHB5 | InterPro:IPR014710 | EnsemblPlants:KRH47601 | ProteinID:KRH47601 | ProteinID:KRH47601.1 | PFAM:PF00190 |
| PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF2 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
| SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI0002338643 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr7:+:3187100..3188256
Molecular Weight (calculated)
21613.3 Da
IEP (calculated)
9.539
GRAVY (calculated)
0.303
Length
208 amino acids
Sequence
(BLAST)
(BLAST)
001: MKMIYIFFLL ALLSSTSHAS VNDFCVANLK GPDSPSGYQC KPPNTVTVND FVLSGFVAGN TTNAFNAALT PAFVTELPGV NGLGISAARL DLAKGGSVPM
101: HSHPGASEIL IMVKGQITAG ILTPGAVYEK TLKPGDVMVF PQGLLHFQAN SGKGKATAFV AFSSANPGAQ LLDLLLFGNS LPSDLVAQTT FLDVAQVKKL
201: KARFGGRG
101: HSHPGASEIL IMVKGQITAG ILTPGAVYEK TLKPGDVMVF PQGLLHFQAN SGKGKATAFV AFSSANPGAQ LLDLLLFGNS LPSDLVAQTT FLDVAQVKKL
201: KARFGGRG
001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N
Arabidopsis Description
GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.