Factsheet for Zm00001d032047_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion, plastid
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032048_P001	Maize	cytosol	55.96	83.72
EES15103	Sorghum	extracellular	74.09	65.0
Os08t0459700-00	Rice	extracellular	62.18	54.79
KRH47602	Soybean	extracellular, vacuole	47.67	44.23
KRH47606	Soybean	extracellular, vacuole	47.67	44.23
Zm00001d037513_P001	Maize	plastid	48.19	43.87
KRH47601	Soybean	endoplasmic reticulum	46.63	43.27
KRH06188	Soybean	extracellular	38.34	40.88
KRH47603	Soybean	extracellular, vacuole	46.63	40.0
KRH07141	Soybean	cytosol	38.34	36.63
KRH06189	Soybean	endoplasmic reticulum, extracellular, vacuole	38.86	36.41
Zm00001d008210_P002	Maize	extracellular	39.9	35.98
KRH07140	Soybean	extracellular, vacuole	38.86	35.71
KRH07144	Soybean	extracellular, vacuole	38.86	35.21
Zm00001d040519_P001	Maize	extracellular	38.86	34.4
Zm00001d018954_P002	Maize	extracellular	38.34	32.03
Zm00001d043710_P001	Maize	extracellular, vacuole	36.27	31.82
Zm00001d011853_P001	Maize	extracellular	36.79	31.42
Zm00001d038137_P001	Maize	extracellular	36.79	31.28
Zm00001d042082_P001	Maize	extracellular	33.68	31.25
KRH47605	Soybean	extracellular	17.1	30.84
Zm00001d034514_P001	Maize	extracellular	35.23	29.82
Zm00001d033583_P001	Maize	extracellular	32.12	27.56
Zm00001d016697_P001	Maize	extracellular	29.53	24.36
Zm00001d027890_P001	Maize	extracellular, vacuole	28.5	23.91

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A1D6KN97	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:Germin_Mn-BS	InterPro:IPR014710	ProteinID:ONM04292.1	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF49	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
UniParc:UPI0008459012	EnsemblPlantsGene:Zm00001d032047	EnsemblPlants:Zm00001d032047_P001	EnsemblPlants:Zm00001d032047_T001	SEG:seg	:

Description

Germin-like protein subfamily 3 member 1

Coordinates

chr1:-:210710799..210711759

Molecular Weight (calculated)

20566.7 Da

IEP (calculated)

6.781

GRAVY (calculated)

0.101

Length

193 amino acids

Sequence
(BLAST)

001: MDLCVANRLL PDTPSGYPCK PKGLVSSDDF YSDALARPGP VIAPFNTSLA SAAVKQLPGL NGLGISATRV DVQPGGVVPM HTHPEASELI FLLEGTLFAG
101: FISAETNKAY VKILKKGDLY VFPQGLLHFQ FNTGNTTATA IAAYSNQNPG LQIAVYALFG NTLTVETVNK TTFVTKEEVM RLKDLFGQSS VPS

Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)

001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG

Arabidopsis Description

GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.