Factsheet for Zm00001d011853_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d042082_P001	Maize	extracellular	80.09	87.02
EES02060	Sorghum	extracellular	85.84	86.61
EES04228	Sorghum	extracellular	84.07	84.44
TraesCS3B01G543600.1	Wheat	extracellular	75.22	75.89
HORVU3Hr1G107930.1	Barley	extracellular	75.22	75.56
TraesCS3B01G543700.1	Wheat	extracellular	74.78	75.11
TraesCS3B01G543800.1	Wheat	extracellular	74.78	75.11
TraesCS3D01G489700.1	Wheat	extracellular	74.78	75.11
HORVU3Hr1G107860.1	Barley	extracellular	74.34	74.67
TraesCS3B01G544200.1	Wheat	extracellular	74.34	74.67
TraesCS3D01G490500.1	Wheat	extracellular	74.34	74.67
HORVU3Hr1G107830.1	Barley	extracellular	73.89	74.22
TraesCS3A01G040900.1	Wheat	extracellular	73.89	74.22
TraesCS3D01G489800.1	Wheat	extracellular	73.89	74.22
TraesCSU01G057500.1	Wheat	extracellular	73.89	74.22
TraesCS7D01G477200.1	Wheat	extracellular	73.01	73.33
Zm00001d038137_P001	Maize	extracellular	66.81	66.52
HORVU3Hr1G107870.1	Barley	extracellular	63.27	64.71
TraesCS3D01G490400.1	Wheat	extracellular	61.06	63.89
Zm00001d008210_P002	Maize	extracellular	60.18	63.55
TraesCSU01G057600.1	Wheat	extracellular	59.73	63.08
Zm00001d040519_P001	Maize	extracellular	57.08	59.17
Zm00001d018954_P002	Maize	extracellular	58.85	57.58
Zm00001d033583_P001	Maize	extracellular	46.46	46.67
Zm00001d043710_P001	Maize	extracellular, vacuole	44.25	45.45
Zm00001d034514_P001	Maize	extracellular	42.48	42.11
Zm00001d037513_P001	Maize	plastid	37.61	40.09
Zm00001d027890_P001	Maize	extracellular, vacuole	39.82	39.13
Zm00001d016697_P001	Maize	extracellular	38.5	37.18
Zm00001d032047_P001	Maize	cytosol	31.42	36.79
Zm00001d032048_P001	Maize	cytosol	17.26	30.23

Protein Annotations

EntrezGene:103636282	Gene3D:2.60.120.10	MapMan:35.1	ProteinID:AQK98148.1	InterPro:Cupin_1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872
InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:K7W1E7	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002217425	EnsemblPlantsGene:Zm00001d011853	EnsemblPlants:Zm00001d011853_P001
EnsemblPlants:Zm00001d011853_T001	SEG:seg	:	:	:	:

Description

Germin-like protein subfamily 2 member 1

Coordinates

chr8:-:162805917..162807020

Molecular Weight (calculated)

23384.0 Da

IEP (calculated)

7.506

GRAVY (calculated)

0.220

Length

226 amino acids

Sequence
(BLAST)

001: MANKLATSSL LAAAVLLMAL AAPSLAGDPD MLQDICVADY KSLKGPLRLN GFPCKRPENV TACDFFSGAL ASAGNTANAL GSAVTAASAD TLPGLNTLGV
101: SLSRIDYAPW GVNPPHVHPR ATEVIFVLQG SLDVGFVAAA SNRLYARTVS AGDVFVFPRG LVHYQRNRGG DPAVALSAFD SQLPGTQPVA EALFGSSPPV
201: PTDVLARSFH VDGGLVEAIR SKFPPK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.