Factsheet for Zm00001d043710_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES01342	Sorghum	extracellular, vacuole	85.0	84.62
Os01t0705100-00	Rice	extracellular	75.91	74.55
TraesCS2A01G109200.1	Wheat	extracellular	73.18	72.85
TraesCS3D01G254200.1	Wheat	extracellular	72.73	72.07
TraesCS3A01G253300.1	Wheat	extracellular	71.82	71.17
TraesCS3B01G285200.1	Wheat	extracellular	71.82	71.17
TraesCS2D01G109300.1	Wheat	vacuole	71.82	70.85
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	62.27	67.49
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	72.27	60.23
GSMUA_Achr4P17250_001	Banana	extracellular	40.45	49.17
GSMUA_AchrUn_...	Banana	extracellular	35.45	48.75
Zm00001d008210_P002	Maize	extracellular	44.55	45.79
Zm00001d034514_P001	Maize	extracellular	46.82	45.18
Zm00001d011853_P001	Maize	extracellular	45.45	44.25
Zm00001d040519_P001	Maize	extracellular	42.73	43.12
Zm00001d038137_P001	Maize	extracellular	44.09	42.73
Zm00001d033583_P001	Maize	extracellular	43.64	42.67
Zm00001d042082_P001	Maize	extracellular	40.0	42.31
Zm00001d018954_P002	Maize	extracellular	43.18	41.13
Zm00001d027890_P001	Maize	extracellular, vacuole	38.18	36.52
Zm00001d032047_P001	Maize	cytosol	31.82	36.27
Zm00001d037513_P001	Maize	plastid	32.27	33.49
Zm00001d016697_P001	Maize	extracellular	33.18	31.2
Zm00001d032048_P001	Maize	cytosol	17.27	29.46

Protein Annotations

EntrezGene:103651278	Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A1D6NEI1	InterPro:Cupin_1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872
InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	ProteinID:ONM38891.1	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF34	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002211F61	EnsemblPlantsGene:Zm00001d043710	EnsemblPlants:Zm00001d043710_P001
EnsemblPlants:Zm00001d043710_T001	SEG:seg	:	:	:	:

Description

Germin-like protein subfamily T member 1

Coordinates

chr3:-:207990045..207990707

Molecular Weight (calculated)

22947.7 Da

IEP (calculated)

6.250

GRAVY (calculated)

0.326

Length

220 amino acids

Sequence
(BLAST)

001: MASAARSAAL RVLLLVAVAI AGALSDPTPL QDTCVADMRA ATPVDGFACK PQSAVVDEDF FSRAIASAAS TANPFGANST RATVATFPGL NTLGVSITRV
101: DLAPGGLNPP HSHPRASELV MVLQGEVLVG FTTGANRLFS KVVRENELFV VPRGLQHFQL NTGAGDAVFV AMFDSQSPGV VTPTFAMFST KPAMPMEVLT
201: KTFLTGEDQV NAIMSKFAGF

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.