Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- plastid 2
- vacuole 3
- extracellular 3
- endoplasmic reticulum 2
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER95401 | Sorghum | vacuole | 86.96 | 82.99 |
| Os03t0179100-00 | Rice | extracellular, vacuole | 75.22 | 76.89 |
| TraesCS4A01G010200.1 | Wheat | cytosol, extracellular | 70.0 | 76.3 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 70.87 | 70.87 |
| TraesCS4B01G294100.1 | Wheat | extracellular | 68.26 | 70.4 |
| HORVU4Hr1G076480.3 | Barley | vacuole | 66.09 | 64.68 |
| GSMUA_Achr1P21920_001 | Banana | endoplasmic reticulum, extracellular | 59.57 | 57.56 |
| VIT_01s0026g00970.t01 | Wine grape | extracellular | 54.35 | 56.56 |
| PGSC0003DMT400058298 | Potato | extracellular, vacuole | 47.39 | 51.66 |
| Solyc05g006500.2.1 | Tomato | extracellular | 47.39 | 49.55 |
| KRH74710 | Soybean | extracellular | 46.96 | 49.09 |
| KRH69437 | Soybean | extracellular | 46.52 | 48.64 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 44.78 | 47.47 |
| Bra031713.1-P | Field mustard | vacuole | 34.35 | 41.58 |
| CDY34891 | Canola | vacuole | 34.35 | 41.58 |
| CDY07800 | Canola | vacuole | 34.35 | 41.36 |
| Zm00001d011853_P001 | Maize | extracellular | 39.13 | 39.82 |
| Zm00001d008210_P002 | Maize | extracellular | 36.52 | 39.25 |
| Zm00001d040519_P001 | Maize | extracellular | 36.96 | 38.99 |
| Zm00001d018954_P002 | Maize | extracellular | 38.7 | 38.53 |
| Zm00001d043710_P001 | Maize | extracellular, vacuole | 36.52 | 38.18 |
| Zm00001d042082_P001 | Maize | extracellular | 34.35 | 37.98 |
| Zm00001d038137_P001 | Maize | extracellular | 37.39 | 37.89 |
| Zm00001d033583_P001 | Maize | extracellular | 34.78 | 35.56 |
| Zm00001d034514_P001 | Maize | extracellular | 34.35 | 34.65 |
| Zm00001d016697_P001 | Maize | extracellular | 33.48 | 32.91 |
| Zm00001d037513_P001 | Maize | plastid | 28.7 | 31.13 |
| Zm00001d032047_P001 | Maize | cytosol | 23.91 | 28.5 |
| Zm00001d032048_P001 | Maize | cytosol | 15.22 | 27.13 |
Protein Annotations
| EntrezGene:103644454 | Gene3D:2.60.120.10 | MapMan:35.1 | UniProt:A0A1D6JQE7 | InterPro:Cupin_1 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 |
| InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | ProteinID:ONL94213.1 | PFAM:PF00190 | PRINTS:PR00325 |
| ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF5 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 |
| SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI000221538A | EnsemblPlantsGene:Zm00001d027890 | EnsemblPlants:Zm00001d027890_P001 | EnsemblPlants:Zm00001d027890_T001 |
| SEG:seg | : | : | : | : | : |
Description
Germin-like protein subfamily 1 member 1
Coordinates
chr1:+:16810190..16810882
Molecular Weight (calculated)
23961.6 Da
IEP (calculated)
6.502
GRAVY (calculated)
0.195
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MSATADGGSI GTGMSHRIIV ALFLSAALCR CDPDLLLDYC VADTSSSQLH LNGLACIDPA SARAEHFATS ALSRASETET AYGFSVTVTS PASSLPGANA
101: QGLAMARTDL APGGLAPPHT HPRASEVALV LAGSVLVGFA DTSYRLYTQL LRAGEAFVVP RGMVHFMYNV DVAAPAVVLS GLNSQSPGAQ LVPFSAFRTE
201: PRVPDEVLKM AFRINGQDVQ RIQRNLGGSS
101: QGLAMARTDL APGGLAPPHT HPRASEVALV LAGSVLVGFA DTSYRLYTQL LRAGEAFVVP RGMVHFMYNV DVAAPAVVLS GLNSQSPGAQ LVPFSAFRTE
201: PRVPDEVLKM AFRINGQDVQ RIQRNLGGSS
001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
Arabidopsis Description
GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.