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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 4
  • endoplasmic reticulum 3
  • vacuole 5
  • plasma membrane 3
  • golgi 3
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
WoLF PSORT:vacuole
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY34891 Canola vacuole 94.76 95.26
AT1G10460.1 Thale cress extracellular, vacuole 73.3 64.52
KRH74710 Soybean extracellular 53.4 46.36
VIT_01s0026g00970.t01 Wine grape extracellular 53.4 46.15
KRH69437 Soybean extracellular 52.36 45.45
PGSC0003DMT400058298 Potato extracellular, vacuole 47.12 42.65
Solyc05g006500.2.1 Tomato extracellular 48.17 41.82
EER95401 Sorghum vacuole 43.98 34.85
GSMUA_Achr1P21920_001 Banana endoplasmic reticulum, extracellular 42.93 34.45
Zm00001d027890_P001 Maize extracellular, vacuole 41.36 34.35
Os03t0179100-00 Rice extracellular, vacuole 40.31 34.22
TraesCS4A01G010200.1 Wheat cytosol, extracellular 37.7 34.12
TraesCS4B01G294100.1 Wheat extracellular 39.79 34.08
CDY47579 Canola extracellular 31.94 32.11
CDY22633 Canola extracellular 35.6 31.48
CDY06361 Canola extracellular 35.6 31.48
TraesCS4D01G293000.1 Wheat endoplasmic reticulum, extracellular, vacuole 37.17 30.87
CDX81907 Canola extracellular 33.51 29.91
CDX93502 Canola extracellular 34.55 29.6
HORVU4Hr1G076480.3 Barley vacuole 36.13 29.36
CDY26706 Canola extracellular 32.46 28.97
CDY21688 Canola extracellular 32.46 28.97
CDY19265 Canola extracellular 32.46 28.97
CDY50897 Canola extracellular 33.51 28.96
CDY31080 Canola extracellular 32.98 28.77
CDY11392 Canola extracellular 32.98 28.64
CDY20692 Canola extracellular 32.98 28.64
CDX87040 Canola extracellular 32.46 28.57
CDY19762 Canola extracellular 32.46 28.57
CDY18833 Canola extracellular 32.46 28.44
CDY45077 Canola extracellular 31.41 28.3
CDY27880 Canola extracellular 31.41 28.3
CDX76609 Canola extracellular 32.46 28.18
CDY11164 Canola extracellular, vacuole 30.37 28.02
CDY05519 Canola extracellular 31.94 27.98
CDY05213 Canola extracellular 31.94 27.98
CDX80572 Canola extracellular 31.94 27.98
CDY61117 Canola extracellular 31.41 27.52
CDX89983 Canola extracellular, vacuole 31.41 27.52
CDY15231 Canola extracellular, vacuole 31.41 27.52
CDY45080 Canola extracellular, plasma membrane, vacuole 30.37 27.49
CDX70935 Canola extracellular, vacuole 30.37 27.49
CDY51841 Canola extracellular, plasma membrane, vacuole 30.37 27.49
CDX74123 Canola extracellular 30.89 27.06
CDX68260 Canola extracellular, vacuole 29.32 27.05
CDY05327 Canola vacuole 27.23 26.8
CDX85429 Canola extracellular 29.32 26.54
CDY16549 Canola extracellular 29.32 26.54
CDX92448 Canola extracellular 29.32 26.54
CDY22866 Canola extracellular 29.32 26.54
CDY49987 Canola extracellular 29.84 26.15
CDY45079 Canola extracellular, vacuole 29.32 25.57
CDY41321 Canola extracellular 29.84 25.22
CDY22215 Canola extracellular 29.84 25.22
CDX96421 Canola vacuole 26.7 23.5
CDX85858 Canola extracellular 27.75 23.14
CDX72929 Canola vacuole 26.18 23.04
CDX68163 Canola extracellular 25.65 22.37
CDX82141 Canola vacuole 21.99 19.0
Protein Annotations
EnsemblPlants:CDY07800EnsemblPlantsGene:GSBRNA2T00124939001Gene3D:2.60.120.10GO:A0A078F065GO:GO:0003674GO:GO:0045735
InterPro:Cupin_1InterPro:IPR014710InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfPANTHER:PTHR31238PANTHER:PTHR31238:SF5
PFAM:PF00190ProteinID:CDY07800ProteinID:CDY07800.1SEG:segSignalP:SignalP-noTMSMART:SM00835
SUPFAM:SSF51182UniParc:UPI0004EED3A7UniProt:A0A078F065MapMan:35.1::
Description
BnaC03g48220DBnaC03g48220D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F065]
Coordinates
chrLK031981:-:43573..44291
Molecular Weight (calculated)
20385.7 Da
IEP (calculated)
7.039
GRAVY (calculated)
0.148
Length
191 amino acids
Sequence
(BLAST)
001: MLINLILAFI LLMGRRVSSD PDPLQDYCVS PPLSPHQHIF LNGNLCKDPT KVTVYDFTTS ALSKPGNTGA NPFMTNVTLT TTTNLPGLNT MGLTMGRLDF
101: GASGVVPPHV HARASEVTVC LDGVLLVGFV DTSVSSALAV SGLTSQNPGT QFVSMVSLDS KLQIPQDVLK RLYHINDQEG YVASIRKNLG G
Best Arabidopsis Sequence Match ( AT1G10460.1 )
(BLAST)
001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
Arabidopsis Description
GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.