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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX93502 Canola extracellular 97.74 96.86
CDY06361 Canola extracellular 90.05 92.13
CDY22633 Canola extracellular 89.59 91.67
CDY20692 Canola extracellular 90.05 90.45
CDY31080 Canola extracellular 88.24 89.04
AT1G09560.1 Thale cress extracellular 87.78 88.58
GSMUA_Achr5P18440_001 Banana extracellular 66.52 67.12
GSMUA_Achr8P18750_001 Banana extracellular, vacuole 64.25 65.74
GSMUA_Achr1P25160_001 Banana extracellular 64.71 65.3
GSMUA_AchrUn_... Banana extracellular 63.35 64.22
TraesCS3A01G165500.1 Wheat extracellular 63.8 64.09
TraesCS3B01G200200.1 Wheat extracellular 63.35 63.64
CDX76609 Canola extracellular 63.35 63.64
TraesCS3D01G176100.1 Wheat extracellular 63.35 63.64
CDY11392 Canola extracellular 62.44 62.73
PGSC0003DMT400047065 Potato cytosol, extracellular 59.28 62.38
Os01t0249200-01 Rice extracellular 63.8 62.11
PGSC0003DMT400047067 Potato cytosol 59.28 62.09
CDX89983 Canola extracellular, vacuole 60.18 61.01
Os05t0277500-01 Rice extracellular 60.63 60.63
EES02420 Sorghum extracellular 61.99 60.62
CDY15231 Canola extracellular, vacuole 59.73 60.55
TraesCS1A01G080000.1 Wheat extracellular 61.09 60.27
TraesCS1D01G081700.1 Wheat extracellular 61.09 60.27
TraesCS1B01G098000.1 Wheat extracellular 61.54 60.18
Solyc01g102390.2.1 Tomato extracellular 59.73 60.0
Solyc01g102400.2.1 Tomato extracellular 59.28 59.55
Solyc01g102380.2.1 Tomato extracellular 60.18 59.38
GSMUA_Achr8P29820_001 Banana extracellular 61.54 59.13
CDY19762 Canola extracellular 56.56 57.6
CDX80572 Canola extracellular 56.11 56.88
CDX87040 Canola extracellular 55.66 56.68
CDY18833 Canola extracellular 55.66 56.42
CDY05519 Canola extracellular 55.66 56.42
CDY61117 Canola extracellular 55.2 55.96
EER95948 Sorghum extracellular 57.92 55.41
CDY05213 Canola extracellular 54.3 55.05
Zm00001d018954_P002 Maize extracellular 57.47 54.98
CDY05327 Canola vacuole 47.96 54.64
CDX74123 Canola extracellular 52.49 53.21
CDY47579 Canola extracellular 45.7 53.16
CDY49987 Canola extracellular 52.04 52.75
HORVU3Hr1G034100.2 Barley cytosol, plastid 58.82 49.24
CDX81907 Canola extracellular 45.7 47.2
CDY19265 Canola extracellular 45.7 47.2
CDY21688 Canola extracellular 45.25 46.73
CDY26706 Canola extracellular 44.8 46.26
KXG32174 Sorghum plastid 62.44 43.67
CDY51841 Canola extracellular, plasma membrane, vacuole 38.46 40.28
HORVU1Hr1G017170.1 Barley extracellular, plastid, vacuole 60.18 39.7
CDX70935 Canola extracellular, vacuole 37.56 39.34
CDY45080 Canola extracellular, plasma membrane, vacuole 37.1 38.86
CDX92448 Canola extracellular 37.1 38.86
CDY16549 Canola extracellular 37.1 38.86
CDX85429 Canola extracellular 37.1 38.86
CDY22866 Canola extracellular 37.1 38.86
CDY27880 Canola extracellular 36.65 38.21
CDY45077 Canola extracellular 36.65 38.21
CDY11164 Canola extracellular, vacuole 34.84 37.2
CDX68260 Canola extracellular, vacuole 34.84 37.2
CDX96421 Canola vacuole 36.2 36.87
CDY45079 Canola extracellular, vacuole 35.75 36.07
CDX68163 Canola extracellular 35.29 35.62
CDY41321 Canola extracellular 36.2 35.4
CDY22215 Canola extracellular 36.2 35.4
CDX72929 Canola vacuole 34.39 35.02
CDY34891 Canola vacuole 29.86 34.74
CDY07800 Canola vacuole 28.96 33.51
CDX85858 Canola extracellular 33.94 32.75
CDX82141 Canola vacuole 24.43 24.43
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078ILT2UniProt:A0A078ILT2EnsemblPlants:CDY50897ProteinID:CDY50897
ProteinID:CDY50897.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00097733001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF39
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMTMHMM:TMhelix
UniParc:UPI0004EE758A:::::
Description
BnaCnng19890DBnaCnng19890D protein [Source:UniProtKB/TrEMBL;Acc:A0A078ILT2]
Coordinates
chrLK032946:-:49473..50619
Molecular Weight (calculated)
23246.1 Da
IEP (calculated)
9.615
GRAVY (calculated)
0.206
Length
221 amino acids
Sequence
(BLAST)
001: MASQTQFLSI SLALVAFLFF IRVSADPDML QDLCVADLSS GIKVNGFPCK DAANITSLDF FSQGIANPGL TNNTFGALVT GANVMTIPGL NTLGVSLARI
101: DYAPGGLNPP HTHPRATEVV YVLEGTLDVG FLTTANKLIA QSLKKGDVFA FPKGLVHFQK NNGRVPASVV AAFNSQLPGT QSLGATLFGS TPPVPDSILA
201: QAFQTSPGTV KHIKTKFQPK K
Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)
001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
Arabidopsis Description
GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.