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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 7
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:plastid
iPSORT:secretory
MultiLoc:vacuole
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra020113.1-P Field mustard extracellular, plasma membrane, vacuole 100.0 100.0
CDY22866 Canola extracellular 95.73 95.73
CDY16549 Canola extracellular 95.73 95.73
CDX92448 Canola extracellular 95.73 95.73
CDX85429 Canola extracellular 95.73 95.73
CDY51841 Canola extracellular, plasma membrane, vacuole 94.31 94.31
CDX70935 Canola extracellular, vacuole 93.84 93.84
AT5G20630.1 Thale cress extracellular, plasma membrane, vacuole 92.89 92.89
CDY45077 Canola extracellular 78.67 78.3
CDY27880 Canola extracellular 78.67 78.3
CDY45079 Canola extracellular, vacuole 79.62 76.71
KRH02617 Soybean nucleus 68.72 69.71
VIT_18s0086g00590.t01 Wine grape cytosol 39.34 67.48
KRH12528 Soybean extracellular 67.77 67.14
CDX68260 Canola extracellular, vacuole 64.45 65.7
PGSC0003DMT400036428 Potato extracellular 64.45 65.38
Solyc03g123410.1.1 Tomato nucleus 63.98 64.9
PGSC0003DMT400030317 Potato extracellular 63.98 64.9
CDY11164 Canola extracellular, vacuole 63.51 64.73
VIT_09s0002g01330.t01 Wine grape cytosol, extracellular, nucleus 28.91 61.62
VIT_09s0002g01320.t01 Wine grape extracellular 60.19 60.77
TraesCS2D01G073700.1 Wheat extracellular 60.66 60.38
TraesCS2B01G090300.1 Wheat extracellular 60.66 60.38
VIT_18s0086g00410.t01 Wine grape extracellular 59.72 60.29
CDX96421 Canola vacuole 61.61 59.91
TraesCS7D01G180200.1 Wheat extracellular, vacuole 60.19 59.91
TraesCS2A01G075000.1 Wheat extracellular 60.19 59.62
Os08t0460000-01 Rice extracellular 60.19 59.62
TraesCS7A01G178300.1 Wheat extracellular 59.72 59.43
TraesCS7B01G084000.1 Wheat plastid 59.72 59.43
CDX72929 Canola vacuole 60.66 58.99
HORVU7Hr1G036720.1 Barley extracellular 59.24 58.96
TraesCS2D01G073600.1 Wheat extracellular 57.82 58.65
Zm00001d037513_P001 Maize plastid 57.82 57.55
KRH19305 Soybean cytosol, extracellular, plastid 57.82 56.22
EES17780 Sorghum extracellular, vacuole 58.29 55.66
VIT_07s0005g05920.t01 Wine grape extracellular 54.5 55.02
VIT_07s0005g05930.t01 Wine grape extracellular 53.55 54.07
VIT_07s0005g05910.t01 Wine grape extracellular 53.55 54.07
VIT_12s0059g00740.t01 Wine grape cytosol 31.28 53.66
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 63.03 51.95
GSMUA_Achr2P18710_001 Banana extracellular 61.14 51.6
VIT_09s0002g01340.t01 Wine grape extracellular, vacuole 52.61 44.76
CDY22633 Canola extracellular 39.34 38.43
CDY06361 Canola extracellular 38.86 37.96
CDY21688 Canola extracellular 38.39 37.85
CDX81907 Canola extracellular 38.39 37.85
CDY19265 Canola extracellular 38.39 37.85
CDX87040 Canola extracellular 38.86 37.79
CDY11392 Canola extracellular 39.34 37.73
CDY05519 Canola extracellular 38.86 37.61
CDY19762 Canola extracellular 38.39 37.33
CDX76609 Canola extracellular 38.86 37.27
CDX93502 Canola extracellular 39.34 37.22
CDY15231 Canola extracellular, vacuole 38.39 37.16
CDY18833 Canola extracellular 38.39 37.16
CDY61117 Canola extracellular 38.39 37.16
CDX89983 Canola extracellular, vacuole 38.39 37.16
CDY05327 Canola vacuole 34.12 37.11
CDY50897 Canola extracellular 38.86 37.1
CDY26706 Canola extracellular 37.44 36.92
CDY20692 Canola extracellular 38.39 36.82
CDX80572 Canola extracellular 37.91 36.7
CDY31080 Canola extracellular 36.97 35.62
CDY47579 Canola extracellular 31.75 35.26
CDX82141 Canola vacuole 36.02 34.39
CDY05213 Canola extracellular 35.07 33.95
CDX74123 Canola extracellular 34.6 33.49
CDY49987 Canola extracellular 34.12 33.03
CDY41321 Canola extracellular 34.12 31.86
CDY22215 Canola extracellular 34.12 31.86
CDX68163 Canola extracellular 32.23 31.05
CDY07800 Canola vacuole 27.49 30.37
CDY34891 Canola vacuole 26.54 29.47
CDX85858 Canola extracellular 31.75 29.26
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078I2K1UniProt:A0A078I2K1EnsemblPlants:CDY45080ProteinID:CDY45080
ProteinID:CDY45080.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00081358001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF92
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI00025433B7
SEG:seg:::::
Description
BnaA02g04960DBnaA02g04960D protein [Source:UniProtKB/TrEMBL;Acc:A0A078I2K1]
Coordinates
chrLK032613:+:98587..99222
Molecular Weight (calculated)
21896.4 Da
IEP (calculated)
6.504
GRAVY (calculated)
0.328
Length
211 amino acids
Sequence
(BLAST)
001: MKMIIHIFFI LSLVSSTSFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFSGLAKA GNTSNLIKAA VTPAFAPAFA GTNGLGVSMA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLQRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDEEV
201: KKLKGVLGGT D
Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)
001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N
Arabidopsis Description
GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.