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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra003784.1-P Field mustard extracellular 98.63 98.63
CDX85858 Canola extracellular 91.32 87.34
AT1G74820.1 Thale cress extracellular 78.54 75.77
CDY26706 Canola extracellular 52.51 53.74
CDY19265 Canola extracellular 52.51 53.74
CDY21688 Canola extracellular 52.05 53.27
CDX81907 Canola extracellular 52.05 53.27
PGSC0003DMT400063164 Potato vacuole 47.95 47.73
Solyc03g113570.1.1 Tomato vacuole 47.49 47.27
PGSC0003DMT400063166 Potato vacuole 45.21 45.62
Solyc03g113580.1.1 Tomato vacuole 44.75 45.16
Os03t0804700-00 Rice plastid 43.38 42.22
TraesCS5B01G462200.1 Wheat extracellular, vacuole 43.38 41.3
TraesCS5D01G464000.1 Wheat extracellular 42.92 40.87
TraesCS5A01G453200.1 Wheat extracellular 42.92 40.87
VIT_17s0000g05360.t01 Wine grape endoplasmic reticulum, extracellular 42.47 40.79
Zm00001d034514_P001 Maize extracellular 42.01 40.35
EER93258 Sorghum endoplasmic reticulum, extracellular 41.55 39.06
CDY05213 Canola extracellular 38.81 38.99
CDY18833 Canola extracellular 38.81 38.99
CDY47579 Canola extracellular 33.33 38.42
Os03t0804500-01 Rice extracellular 40.18 37.77
CDY49987 Canola extracellular 37.44 37.61
CDX74123 Canola extracellular 36.99 37.16
CDX89983 Canola extracellular, vacuole 36.53 36.7
CDY15231 Canola extracellular, vacuole 36.07 36.24
CDY06361 Canola extracellular 35.62 36.11
CDX76609 Canola extracellular 36.07 35.91
CDX93502 Canola extracellular 36.53 35.87
CDY22633 Canola extracellular 35.16 35.65
CDY11392 Canola extracellular 35.62 35.45
CDY50897 Canola extracellular 35.62 35.29
CDY31080 Canola extracellular 35.16 35.16
CDY20692 Canola extracellular 34.7 34.55
CDX87040 Canola extracellular 33.79 34.1
CDY19762 Canola extracellular 33.79 34.1
CDX80572 Canola extracellular 33.79 33.95
CDY05519 Canola extracellular 33.79 33.95
CDY61117 Canola extracellular 33.33 33.49
HORVU5Hr1G109190.1 Barley extracellular, mitochondrion, vacuole 43.84 32.99
CDY41321 Canola extracellular 33.79 32.74
CDY22215 Canola extracellular 33.79 32.74
CDY45080 Canola extracellular, plasma membrane, vacuole 31.05 32.23
CDY27880 Canola extracellular 31.05 32.08
CDY45077 Canola extracellular 31.05 32.08
CDY05327 Canola vacuole 28.31 31.96
CDY11164 Canola extracellular, vacuole 30.14 31.88
CDY51841 Canola extracellular, plasma membrane, vacuole 30.59 31.75
CDX68260 Canola extracellular, vacuole 29.68 31.4
CDY16549 Canola extracellular 30.14 31.28
CDX70935 Canola extracellular, vacuole 30.14 31.28
CDX92448 Canola extracellular 30.14 31.28
CDY22866 Canola extracellular 30.14 31.28
CDX85429 Canola extracellular 30.14 31.28
CDX72929 Canola vacuole 30.59 30.88
CDX96421 Canola vacuole 30.59 30.88
CDY45079 Canola extracellular, vacuole 29.68 29.68
CDY34891 Canola vacuole 22.83 26.32
CDY07800 Canola vacuole 22.37 25.65
CDX82141 Canola vacuole 22.37 22.17
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078BZ48EnsemblPlants:CDX68163ProteinID:CDX68163ProteinID:CDX68163.1
InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0030145GO:GO:0045735EnsemblPlantsGene:GSBRNA2T00099417001
InterPro:GerminInterPro:IPR014710PFAM:PF00190PRINTS:PR00325PANTHER:PTHR31238PANTHER:PTHR31238:SF46
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0004EDB1DD
SEG:seg:::::
Description
BnaA07g22030D
Coordinates
chrLK031787:+:4198364..4199023
Molecular Weight (calculated)
23462.4 Da
IEP (calculated)
6.087
GRAVY (calculated)
0.186
Length
219 amino acids
Sequence
(BLAST)
001: MANVPQISSS ILLTLCLTLF TNPALSDYLN PLQDFCVADL QATPSNTGYP CKSQVTSEDF FYSGLGTPLN TSNPKGVAAN RANLMTFPGL NTMGISMYNV
101: AVAPGVANPP HSHPGVTEAG IVVEGSVLIG FLTNNYTLYS KVAGPGDMFV IPPGLIHYEM NVGKTEARLL TVVASEWPSE VLVPHTLFLA KPAIPDFVLE
201: KIFKTDGKTI NMLRTKLTN
Best Arabidopsis Sequence Match ( AT1G74820.1 )
(BLAST)
001: MAHISQISSF LSIVLIFLAL CITLFTNPTL SLPALKLNPF QDFCVADLQA TPTNSGYPCK SQVTSEDFFY SGLNTPLNTS NPKGIAANPA NLLTFPGLNT
101: LGISMYNVAI APGGYNQPHS HPGVTEAGVV IEGSVLVGFL TTNYTLYSKV IGPGDMFVIP PGLIHYEGNV GKTQCRLLTV VADDLPSEVG VPHTLLATKP
201: AIPNEVLISA FKADSKTINM LRSKFTA
Arabidopsis Description
Germin-like protein subfamily T member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S772]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.