Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G464000.1 | Wheat | extracellular | 97.83 | 97.83 |
| TraesCS5B01G462200.1 | Wheat | extracellular, vacuole | 97.83 | 97.83 |
| HORVU5Hr1G109190.1 | Barley | extracellular, mitochondrion, vacuole | 93.48 | 73.88 |
| Os03t0804500-01 | Rice | extracellular | 71.3 | 70.39 |
| Zm00001d034514_P001 | Maize | extracellular | 69.57 | 70.18 |
| EER93258 | Sorghum | endoplasmic reticulum, extracellular | 70.43 | 69.53 |
| PGSC0003DMT400063164 | Potato | vacuole | 50.87 | 53.18 |
| PGSC0003DMT400063166 | Potato | vacuole | 49.57 | 52.53 |
| Solyc03g113570.1.1 | Tomato | vacuole | 50.0 | 52.27 |
| Solyc03g113580.1.1 | Tomato | vacuole | 48.7 | 51.61 |
| VIT_17s0000g05360.t01 | Wine grape | endoplasmic reticulum, extracellular | 49.57 | 50.0 |
| CDY19265 | Canola | extracellular | 46.09 | 49.53 |
| CDY26706 | Canola | extracellular | 45.65 | 49.07 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 46.52 | 48.64 |
| CDY21688 | Canola | extracellular | 45.22 | 48.6 |
| CDX81907 | Canola | extracellular | 45.22 | 48.6 |
| Bra031058.1-P | Field mustard | extracellular | 45.22 | 48.6 |
| Bra025704.1-P | Field mustard | extracellular | 45.22 | 48.6 |
| AT1G18980.1 | Thale cress | extracellular | 46.09 | 48.18 |
| TraesCS4A01G279200.1 | Wheat | extracellular | 46.09 | 47.32 |
| TraesCS4A01G181700.1 | Wheat | extracellular | 46.09 | 47.32 |
| TraesCS6A01G383000.1 | Wheat | extracellular | 44.35 | 47.22 |
| TraesCS4A01G279300.1 | Wheat | extracellular | 45.65 | 47.09 |
| TraesCS4A01G279100.1 | Wheat | extracellular | 45.22 | 46.85 |
| TraesCS6A01G382900.1 | Wheat | extracellular | 43.91 | 46.76 |
| TraesCS4A01G181900.1 | Wheat | extracellular | 45.22 | 46.64 |
| TraesCS6A01G382000.1 | Wheat | cytosol | 24.35 | 45.9 |
| TraesCS6A01G382200.1 | Wheat | extracellular | 43.04 | 45.83 |
| TraesCS2A01G109200.1 | Wheat | extracellular | 43.91 | 45.7 |
| TraesCS4A01G278900.1 | Wheat | extracellular, unclear | 44.35 | 44.93 |
| TraesCS6A01G382100.1 | Wheat | extracellular, plasma membrane, vacuole | 42.17 | 44.91 |
| TraesCS3A01G040900.1 | Wheat | extracellular | 43.91 | 44.89 |
| TraesCS2A01G211800.1 | Wheat | extracellular | 43.91 | 44.49 |
| TraesCS4A01G181600.1 | Wheat | mitochondrion | 33.91 | 44.32 |
| TraesCS3A01G165500.1 | Wheat | extracellular | 42.17 | 44.09 |
| TraesCS3A01G253300.1 | Wheat | extracellular | 41.74 | 43.24 |
| TraesCS4A01G181800.1 | Wheat | extracellular | 32.61 | 43.1 |
| CDX68163 | Canola | extracellular | 40.87 | 42.92 |
| Bra003784.1-P | Field mustard | extracellular | 40.43 | 42.47 |
| TraesCS1A01G080000.1 | Wheat | extracellular | 40.43 | 41.52 |
| AT1G74820.1 | Thale cress | extracellular | 40.0 | 40.53 |
| CDX85858 | Canola | extracellular | 39.57 | 39.74 |
| TraesCS6A01G028700.1 | Wheat | extracellular, unclear | 38.26 | 38.6 |
| TraesCS7A01G178300.1 | Wheat | extracellular | 35.22 | 38.21 |
| TraesCS2A01G075000.1 | Wheat | extracellular | 34.78 | 37.56 |
| TraesCS4A01G010200.1 | Wheat | cytosol, extracellular | 33.04 | 36.02 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 |
| ScanProsite:PS00725 | PFscan:PS51257 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF46 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
| SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS5A01G453200 | EnsemblPlants:TraesCS5A01G453200.1 |
| SEG:seg | : | : | : | : | : |
Description
No Description!
Coordinates
chr5A:+:634622448..634623140
Molecular Weight (calculated)
23756.5 Da
IEP (calculated)
6.670
GRAVY (calculated)
0.360
Length
230 amino acids
Sequence
(BLAST)
(BLAST)
001: MARSRVSIMP SPVLLLIVAV AALVSACAAD PEPVQDFCVA AATNGSADHP SYPGFPCKPA SAVVSDDFFF AGLARSGAAD AAESPFGSSV TSGNVAAFPG
101: LNTLGVSINR VDLAPGGVNP LHSHPRAAEL VHVVTGQMLV GFVSTAGTFY SKVVREGESF VIPRGMVHFQ FNTGKEAARA VTVFNSQLPG VVLAAPSLFG
201: ADPEIPDAVL SKSFQVDGEI IKLLKSKFRT
101: LNTLGVSINR VDLAPGGVNP LHSHPRAAEL VHVVTGQMLV GFVSTAGTFY SKVVREGESF VIPRGMVHFQ FNTGKEAARA VTVFNSQLPG VVLAAPSLFG
201: ADPEIPDAVL SKSFQVDGEI IKLLKSKFRT
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.