Factsheet for Solyc03g113580.1.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 8
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400063166	Potato	vacuole	94.01	94.01
Solyc03g113570.1.1	Tomato	vacuole	84.79	83.64
Bra031058.1-P	Field mustard	extracellular	61.75	62.62
CDY26706	Canola	extracellular	61.75	62.62
CDY19265	Canola	extracellular	61.29	62.15
CDY21688	Canola	extracellular	61.29	62.15
CDX81907	Canola	extracellular	60.83	61.68
Bra025704.1-P	Field mustard	extracellular	60.37	61.22
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	64.06	60.96
AT1G18980.1	Thale cress	extracellular	61.75	60.91
AT1G18970.1	Thale cress	extracellular, vacuole	59.45	58.64
Os03t0804700-00	Rice	plastid	51.15	49.33
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	52.07	49.13
Zm00001d034514_P001	Maize	extracellular	51.61	49.12
TraesCS5A01G453200.1	Wheat	extracellular	51.61	48.7
TraesCS5D01G464000.1	Wheat	extracellular	51.15	48.26
EER93258	Sorghum	endoplasmic reticulum, extracellular	51.15	47.64
Os03t0804500-01	Rice	extracellular	50.69	47.21
Solyc01g102380.2.1	Tomato	extracellular	47.47	45.98
Solyc01g102390.2.1	Tomato	extracellular	46.54	45.91
Solyc01g102400.2.1	Tomato	extracellular	46.08	45.45
AT1G74820.1	Thale cress	extracellular	47.0	44.93
CDX68163	Canola	extracellular	45.16	44.75
Bra003784.1-P	Field mustard	extracellular	44.7	44.29
CDX85858	Canola	extracellular	45.16	42.79
Solyc11g006980.1.1	Tomato	extracellular	39.17	40.09
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	51.61	38.49
Solyc07g041720.1.1	Tomato	nucleus, plastid	34.56	35.55
Solyc05g006500.2.1	Tomato	extracellular	35.94	35.45
Solyc03g123410.1.1	Tomato	nucleus	33.18	34.62

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:K4BKL0	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	EnsemblPlantsGene:Solyc03g113580.1	EnsemblPlants:Solyc03g113580.1.1	UniParc:UPI0002767DF5	SEG:seg	:

Description

No Description!

Coordinates

chr3:-:63666467..63667120

Molecular Weight (calculated)

23193.2 Da

IEP (calculated)

6.791

GRAVY (calculated)

0.277

Length

217 amino acids

Sequence
(BLAST)

001: MAIRVTFLLV MLVVLPFPSH SADPDPLQDF CVGILNDTSA SINGFPCKPT SQVTSDDFFF DGLTKEGNTD NVFGFTATVG NVLAFPGLNT LGLSMNRVDF
101: APGGLNPPHS HPRATETGVV IKGKLYVGFL TTNNVLHAKV LTVGEMFVVP RGLVHFQMNV GKEKAMTITA FNSHLPGSVV LPTTLFASMP PIPNNVLTKA
201: FQVEASVIDD IKAKFGS

Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)

001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV

Arabidopsis Description

At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.