Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- extracellular 8
- endoplasmic reticulum 5
- vacuole 7
- plasma membrane 5
- golgi 5
- peroxisome 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
plastid:
27992503
|
msms PMID:
27992503
doi
Department of Biochemistry, Molecular Biology, Entomology and Plant Pathology, Mississippi State University, Starkville, Mississippi, United States of America., Institute of Food Crops, Jiangsu Academy of Agricultural Sciences, Jiangsu High Quality Rice Research and Development Center, Nanjing Branch of China National Center for Rice Improvement, Nanjing, Jiangsu, China.
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os03t0804500-01 | Rice | extracellular | 74.22 | 71.67 |
| CDY19265 | Canola | extracellular | 50.22 | 52.8 |
| Bra031058.1-P | Field mustard | extracellular | 49.78 | 52.34 |
| CDX81907 | Canola | extracellular | 49.78 | 52.34 |
| CDY21688 | Canola | extracellular | 49.78 | 52.34 |
| PGSC0003DMT400063166 | Potato | vacuole | 50.22 | 52.07 |
| CDY26706 | Canola | extracellular | 49.33 | 51.87 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 50.67 | 51.82 |
| Bra025704.1-P | Field mustard | extracellular | 48.89 | 51.4 |
| Solyc03g113570.1.1 | Tomato | vacuole | 50.22 | 51.36 |
| Solyc03g113580.1.1 | Tomato | vacuole | 49.33 | 51.15 |
| AT1G18980.1 | Thale cress | extracellular | 49.33 | 50.45 |
| PGSC0003DMT400063164 | Potato | vacuole | 49.33 | 50.45 |
| VIT_17s0000g05360.t01 | Wine grape | endoplasmic reticulum, extracellular | 49.78 | 49.12 |
| Os01t0284500-01 | Rice | extracellular | 46.22 | 48.15 |
| Os01t0705100-00 | Rice | extracellular | 46.67 | 46.88 |
| Os05t0277500-01 | Rice | extracellular | 44.44 | 45.25 |
| Os03t0694000-01 | Rice | extracellular | 45.33 | 44.54 |
| Os03t0693700-01 | Rice | extracellular, plasma membrane, vacuole | 44.89 | 44.49 |
| Os03t0693800-00 | Rice | extracellular | 44.44 | 43.67 |
| Os01t0249200-01 | Rice | extracellular | 44.0 | 43.61 |
| Os03t0693900-00 | Rice | extracellular | 44.0 | 43.61 |
| CDX68163 | Canola | extracellular | 42.22 | 43.38 |
| Os01t0952000-02 | Rice | extracellular | 42.67 | 43.05 |
| Bra003784.1-P | Field mustard | extracellular | 41.78 | 42.92 |
| Os03t0651800-00 | Rice | extracellular | 42.22 | 42.79 |
| Os01t0952100-00 | Rice | extracellular | 44.44 | 42.55 |
| AT1G74820.1 | Thale cress | extracellular | 41.33 | 40.97 |
| CDX85858 | Canola | extracellular | 40.44 | 39.74 |
| Os02t0532500-01 | Rice | extracellular | 40.0 | 39.3 |
| Os08t0460000-01 | Rice | extracellular | 36.44 | 38.5 |
| Os08t0459700-00 | Rice | extracellular | 34.22 | 35.16 |
| Os03t0179100-00 | Rice | extracellular, vacuole | 35.11 | 35.11 |
| Os04t0288100-00 | Rice | mitochondrion | 28.44 | 25.81 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:4334489 | ProteinID:AAS07230.1 | ProteinID:ABF99426.1 | ProteinID:BAF13536.2 |
| ProteinID:BAS86930.1 | InterPro:Cupin_1 | ProteinID:EAZ28969.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 |
| GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 | GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 |
| GO:GO:0046872 | GO:GO:0048046 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | EnsemblPlantsGene:Os03g0804700 |
| EnsemblPlants:Os03t0804700-00 | PFAM:PF00190 | PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF46 |
| UniProt:Q75HJ4 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM |
| UniParc:UPI000023951E | RefSeq:XP_015630140.1 | SEG:seg | : | : | : |
Description
GERMIN-LIKE PROTEIN 3-8Germin-like protein 3-8. (Os03t0804700-00)
Coordinates
chr3:+:33591195..33591872
Molecular Weight (calculated)
23128.7 Da
IEP (calculated)
5.593
GRAVY (calculated)
0.443
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MSRTSSAPLL VLSAALAVLA STCIADPEPV QDFCVAVVPR AGDAAAAACP AYPGFPCKPA STVVSDDFFF AGLAVASDTD NRFGFNVTAA NAETFPGLNT
101: LGVSIGRVDL APGGVNPLHS HPRATELIHV VAGRVLAGFV STAGEFYSKV LGEGETFVVP RGMIHFQYNV GGVAAQVITA FNSQMPGVVA AGSTLFGSDP
201: EIPDAVLAKS FQVDAKIIKL LKSKF
101: LGVSIGRVDL APGGVNPLHS HPRATELIHV VAGRVLAGFV STAGEFYSKV LGEGETFVVP RGMIHFQYNV GGVAAQVITA FNSQMPGVVA AGSTLFGSDP
201: EIPDAVLAKS FQVDAKIIKL LKSKF
001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV
Arabidopsis Description
GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.