Factsheet for Os01t0952000-02

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os03t0651800-00	Rice	extracellular	89.69	90.09
Os01t0284500-01	Rice	extracellular	67.71	69.91
Os01t0952100-00	Rice	extracellular	65.02	61.7
Os05t0277500-01	Rice	extracellular	60.99	61.54
Os01t0249200-01	Rice	extracellular	60.54	59.47
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	45.29	44.49
Os03t0804700-00	Rice	plastid	43.05	42.67
Os03t0694000-01	Rice	extracellular	43.5	42.36
Os01t0705100-00	Rice	extracellular	42.15	41.96
Os03t0804500-01	Rice	extracellular	43.5	41.63
Os03t0693800-00	Rice	extracellular	42.6	41.48
Os03t0693900-00	Rice	extracellular	42.15	41.41
Os08t0460000-01	Rice	extracellular	38.12	39.91
Os02t0532500-01	Rice	extracellular	38.56	37.55
Os03t0179100-00	Rice	extracellular, vacuole	36.77	36.44
Os08t0459700-00	Rice	extracellular	32.29	32.88
Os04t0288100-00	Rice	mitochondrion	29.15	26.21

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:4325743	EMBL:AF072695	EMBL:AK060864	ProteinID:BAB64690.1
ProteinID:BAD87852.1	ProteinID:BAF07330.1	ProteinID:BAS76249.1	InterPro:Cupin_1	ProteinID:EAZ14851.1	GO:GO:0003674
GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006810
GO:GO:0007275	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0010497	GO:GO:0030145
GO:GO:0030312	GO:GO:0045735	GO:GO:0046872	GO:GO:0048046	GO:GO:2000280	InterPro:Germin
InterPro:Germin_Mn-BS	InterPro:IPR014710	EnsemblPlantsGene:Os01g0952000	EnsemblPlants:Os01t0952000-02	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	UniProt:Q942A8	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI00000A3E78	RefSeq:XP_015644058.1	SEG:seg

Description

germin-like protein 8, german-like protein 1-4Similar to Germin-like protein 1-3. (Os01t0952000-01);RmlC-like jelly roll fold domain containing protein. (Os01t0952000-02)

Coordinates

chr1:+:41914684..41915921

Molecular Weight (calculated)

23627.7 Da

IEP (calculated)

8.484

GRAVY (calculated)

0.279

Length

223 amino acids

Sequence
(BLAST)

001: MAKLILATFA VVFMALAATS LAGDPDMLQD VCVADYKSLK GPLRLNGFPC KRIENVTAND FFFDGLMKAG NTGNAVGSVV TAASVESLPG LNTMGVSMAR
101: IDYAPWGLNP PHTHPRATEI IFVVEGSLDV GFVTTANKLF TRTVCKGEVF VFPRGLVHFQ KNNGNTPAFA IAALNSQLPG TQSIAAALFG AAPPLPSDTL
201: ARAFQVDGGM VEFIKSKFVP PKY

Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)

001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK

Arabidopsis Description

GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.