Factsheet for Os08t0460000-01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

mitochondrion: 15069638
extracellular: 18372294
nucleus: 19621931
extracellular: 23159799
nucleus: 24133045
extracellular: 25047395
plasma membrane: 27800704
extracellular: 28232208

msms PMID: 24133045 doi

DK Jaiswal, D Ray, MK Choudhary, P Subba, A Kumar, J Verma, R Kumar, A Datta, S Chakraborty, N Chakraborty

National Institute of Plant Genome Research, New Delhi, India.

msms PMID: 27800704 doi

J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu

Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

msms PMID: 15069638 doi

N Tanaka, M Fujita, H Handa, S Murayama, M Uemura, Y Kawamura, T Mitsui, S Mikami, Y Tozawa, T Yoshinaga, S Komatsu

Department of Molecular Genetics, National Institute of Agrobiological Sciences, 305-8602, Tsukuba, Japan.

msms PMID: 23159799 doi

SG Kim, Y Wang, KH Lee, ZY Park, J Park, J Wu, SJ Kwon, YH Lee, GK Agrawal, R Rakwal, ST Kim, KY Kang

Plant Molecular Biology and Biotechnology Research Center, Gyeongsang National University, Jinju, 660-701, South Korea.

msms PMID: 18372294 doi

T Aki, M Shigyo, R Nakano, T Yoneyama, S Yanagisawa

Department of Applied Biological Chemistry, Graduate School of Agricultural and Life Sciences, The University of Tokyo, Tokyo, 113-8657 Japan.

msms PMID: 19621931 doi

T Aki, S Yanagisawa

Department of Applied Biological Chemistry, The University of Tokyo, Japan.

msms PMID: 28232208 doi

Y Wang, R Gupta, W Song, HH Huh, SE Lee, J Wu, GK Agrawal, R Rakwal, KY Kang, SR Park, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea., Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang 627-707, South Korea. Electronic address: stkim71@pusan.ac.kr., Department of Plant Microbe Interactions, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Division of Applied Life Science (BK21 Program), Gyeongsang National University, Jinju, South Korea., National Academy of Agricultural Science, Rural Development Administration, Suwon 441-707, South Korea. Electronic address: srpark@korea.kr., Plant Proteomics Group, Max Planck Institute for Plant Breeding Research, Carl-von-Linneweg 10, Cologne 50829, Germany., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal., Research Laboratory for Biotechnology and Biochemistry (RLABB), GPO 13265, Kathmandu 44600, Nepal; GRADE (Global Research Arch for Developing Education) Academy, Pvt. Ltd, Adarsh Nagar-13, Birgunj 44300, Nepal; Faculty of Health and Sport Sciences, Tsukuba International Academy for Sport Studies (TIAS), University of Tsukuba, 1-1-1 Tennodai, Tsukuba, 305-8574, Ibaraki, Japan.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU7Hr1G036720.1	Barley	extracellular	90.14	90.57
TraesCS7A01G178300.1	Wheat	extracellular	90.14	90.57
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	89.67	90.09
TraesCS7B01G084000.1	Wheat	plastid	89.67	90.09
TraesCS2B01G090300.1	Wheat	extracellular	87.79	88.21
TraesCS2D01G073700.1	Wheat	extracellular	86.39	86.79
TraesCS2A01G075000.1	Wheat	extracellular	85.92	85.92
Zm00001d037513_P001	Maize	plastid	85.45	85.85
TraesCS2D01G073600.1	Wheat	extracellular	83.57	85.58
EES17780	Sorghum	extracellular, vacuole	84.04	81.0
KRH02617	Soybean	nucleus	61.5	62.98
VIT_11s0016g01220.t01	Wine grape	extracellular	61.5	62.98
AT1G72610.1	Thale cress	extracellular, vacuole	59.15	60.58
CDY11164	Canola	extracellular, vacuole	58.69	60.39
CDX68260	Canola	extracellular, vacuole	58.69	60.39
KRH06186	Soybean	extracellular, vacuole	59.15	60.29
VIT_18s0086g00410.t01	Wine grape	extracellular	59.15	60.29
CDY51841	Canola	extracellular, plasma membrane, vacuole	59.62	60.19
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	59.62	60.19
CDY45080	Canola	extracellular, plasma membrane, vacuole	59.62	60.19
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	59.62	60.19
PGSC0003DMT400036428	Potato	extracellular	58.69	60.1
PGSC0003DMT400030317	Potato	extracellular	58.69	60.1
KRH12528	Soybean	extracellular	60.09	60.09
CDX70935	Canola	extracellular, vacuole	59.15	59.72
Bra003874.1-P	Field mustard	extracellular	57.75	59.42
VIT_09s0002g01320.t01	Wine grape	extracellular	58.22	59.33
KRH47600	Soybean	extracellular	58.22	59.33
Solyc03g123410.1.1	Tomato	nucleus	57.75	59.13
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	70.89	58.98
GSMUA_Achr2P18710_001	Banana	extracellular	69.01	58.8
Solyc07g041720.1.1	Tomato	nucleus, plastid	58.22	58.77
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	58.22	58.77
Bra002316.1-P	Field mustard	extracellular	58.22	58.77
CDY22866	Canola	extracellular	58.22	58.77
CDY16549	Canola	extracellular	58.22	58.77
CDX92448	Canola	extracellular	58.22	58.77
CDX85429	Canola	extracellular	58.22	58.77
VIT_18s0086g00590.t01	Wine grape	cytosol	33.8	58.54
PGSC0003DMT400033858	Potato	extracellular	57.75	58.29
CDX72929	Canola	vacuole	56.81	55.76
CDX96421	Canola	vacuole	55.87	54.84
Bra016047.1-P	Field mustard	vacuole	55.87	54.84
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	25.35	54.55
VIT_07s0005g05920.t01	Wine grape	extracellular	53.05	54.07
Os08t0459700-00	Rice	extracellular	55.4	53.88
VIT_07s0005g05910.t01	Wine grape	extracellular	52.11	53.11
VIT_07s0005g05930.t01	Wine grape	extracellular	52.11	53.11
KRH19305	Soybean	cytosol, extracellular, plastid	53.99	53.0
Bra020115.1-P	Field mustard	extracellular	52.58	52.83
CDY27880	Canola	extracellular	52.58	52.83
CDY45077	Canola	extracellular	52.58	52.83
VIT_12s0059g00740.t01	Wine grape	cytosol	29.58	51.22
CDY45079	Canola	extracellular, vacuole	51.17	49.77
Bra020114.1-P	Field mustard	extracellular, vacuole	51.17	49.77
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	51.17	43.95
Os05t0277500-01	Rice	extracellular	45.07	43.44
Os01t0284500-01	Rice	extracellular	41.78	41.2
Os03t0651800-00	Rice	extracellular	40.85	39.19
Os01t0952000-02	Rice	extracellular	39.91	38.12
Os04t0288100-00	Rice	mitochondrion	44.13	37.9
Os01t0249200-01	Rice	extracellular	39.44	37.0
Os03t0804700-00	Rice	plastid	38.5	36.44
Os01t0952100-00	Rice	extracellular	39.91	36.17
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	38.03	35.68
Os03t0804500-01	Rice	extracellular	38.03	34.76
CDX82141	Canola	vacuole	35.21	33.94
Os01t0705100-00	Rice	extracellular	35.21	33.48
Os03t0694000-01	Rice	extracellular	35.68	33.19
Os03t0693800-00	Rice	extracellular	35.21	32.75
Os03t0693900-00	Rice	extracellular	34.74	32.6
Os02t0532500-01	Rice	extracellular	34.27	31.88
Os03t0179100-00	Rice	extracellular, vacuole	31.46	29.78

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:4345763	EMBL:AB010876	EMBL:AF032975	EMBL:AF051156
EMBL:AK065284	EMBL:AK104729	ProteinID:BAB17848.1	ProteinID:BAD09603.1	ProteinID:BAD09958.1	ProteinID:BAF23890.1
ProteinID:BAT05757.1	InterPro:Cupin_1	ProteinID:EAZ42986.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0031012
GO:GO:0045735	GO:GO:0046872	GO:GO:0048046	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710
EnsemblPlantsGene:Os08g0460000	EnsemblPlants:Os08t0460000-01	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238
PANTHER:PTHR31238:SF2	UniProt:Q6ZBZ2	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI000009EB80	RefSeq:XP_015648639.1	SEG:seg	:	:

Description

GERMIN-LIKE PROTEIN 1Similar to Germin-like protein 1 precursor. (Os08t0460000-01)

Coordinates

chr8:-:22558107..22559044

Molecular Weight (calculated)

21862.5 Da

IEP (calculated)

6.497

GRAVY (calculated)

0.535

Length

213 amino acids

Sequence
(BLAST)

001: MAKAVMMLPV LLSFLLLPFS SMALTQDFCV ADLTCSDTPA GYPCKASVGA GDFAYHGLAA AGNTSNLIKA AVTPAFVGQF PGVNGLGISA ARLDIAVGGV
101: VPLHTHPAAS ELLFVTQGTV AAGFITSSSN TVYTRTLYAG DIMVFPQGLL HYQYNAGQSA AVALVAFSGP NPGLQITDYA LFANNLPSAI VEKVTFLDDA
201: QVKKLKSVLG GSG

Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)

001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG

Arabidopsis Description

GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.