CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY51841	Canola	extracellular, plasma membrane, vacuole	95.73	95.73
CDY45080	Canola	extracellular, plasma membrane, vacuole	93.84	93.84
CDY16549	Canola	extracellular	92.42	92.42
CDY22866	Canola	extracellular	92.42	92.42
CDX85429	Canola	extracellular	92.42	92.42
CDX92448	Canola	extracellular	92.42	92.42
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	91.47	91.47
CDY27880	Canola	extracellular	75.83	75.47
CDY45077	Canola	extracellular	75.83	75.47
CDY45079	Canola	extracellular, vacuole	77.73	74.89
KRH02617	Soybean	nucleus	68.72	69.71
VIT_18s0086g00590.t01	Wine grape	cytosol	39.34	67.48
KRH12528	Soybean	extracellular	67.77	67.14
PGSC0003DMT400036428	Potato	extracellular	65.88	66.83
Solyc03g123410.1.1	Tomato	nucleus	65.4	66.35
CDX68260	Canola	extracellular, vacuole	64.93	66.18
PGSC0003DMT400030317	Potato	extracellular	64.45	65.38
CDY11164	Canola	extracellular, vacuole	63.98	65.22
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	28.91	61.62
CDX96421	Canola	vacuole	61.61	59.91
TraesCS2B01G090300.1	Wheat	extracellular	60.19	59.91
TraesCS2D01G073700.1	Wheat	extracellular	60.19	59.91
VIT_09s0002g01320.t01	Wine grape	extracellular	59.24	59.81
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	59.72	59.43
VIT_18s0086g00410.t01	Wine grape	extracellular	58.77	59.33
Os08t0460000-01	Rice	extracellular	59.72	59.15
TraesCS2A01G075000.1	Wheat	extracellular	59.72	59.15
TraesCS7B01G084000.1	Wheat	plastid	59.24	58.96
TraesCS7A01G178300.1	Wheat	extracellular	59.24	58.96
CDX72929	Canola	vacuole	60.19	58.53
HORVU7Hr1G036720.1	Barley	extracellular	58.77	58.49
TraesCS2D01G073600.1	Wheat	extracellular	57.35	58.17
KRH19305	Soybean	cytosol, extracellular, plastid	58.77	57.14
Zm00001d037513_P001	Maize	plastid	56.87	56.6
VIT_07s0005g05920.t01	Wine grape	extracellular	54.98	55.5
EES17780	Sorghum	extracellular, vacuole	57.35	54.75
VIT_07s0005g05910.t01	Wine grape	extracellular	54.03	54.55
VIT_07s0005g05930.t01	Wine grape	extracellular	54.03	54.55
VIT_12s0059g00740.t01	Wine grape	cytosol	30.81	52.85
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	63.03	51.95
GSMUA_Achr2P18710_001	Banana	extracellular	59.72	50.4
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	52.61	44.76
CDY22633	Canola	extracellular	39.81	38.89
CDY06361	Canola	extracellular	39.34	38.43
CDX81907	Canola	extracellular	38.39	37.85
CDY19265	Canola	extracellular	38.39	37.85
CDY21688	Canola	extracellular	38.39	37.85
CDX93502	Canola	extracellular	39.81	37.67
CDY50897	Canola	extracellular	39.34	37.56
CDY11392	Canola	extracellular	38.86	37.27
CDY20692	Canola	extracellular	38.86	37.27
CDX87040	Canola	extracellular	37.91	36.87
CDX76609	Canola	extracellular	38.39	36.82
CDY05519	Canola	extracellular	37.91	36.7
CDY15231	Canola	extracellular, vacuole	37.91	36.7
CDX89983	Canola	extracellular, vacuole	37.91	36.7
CDY05327	Canola	vacuole	33.65	36.6
CDY26706	Canola	extracellular	36.97	36.45
CDY19762	Canola	extracellular	37.44	36.41
CDY61117	Canola	extracellular	37.44	36.24
CDY18833	Canola	extracellular	37.44	36.24
CDY31080	Canola	extracellular	37.44	36.07
CDX80572	Canola	extracellular	36.97	35.78
CDX82141	Canola	vacuole	36.02	34.39
CDY47579	Canola	extracellular	30.81	34.21
CDY05213	Canola	extracellular	34.12	33.03
CDX74123	Canola	extracellular	33.65	32.57
CDY49987	Canola	extracellular	33.18	32.11
CDY41321	Canola	extracellular	33.65	31.42
CDY22215	Canola	extracellular	33.65	31.42
CDY07800	Canola	vacuole	27.49	30.37
CDX68163	Canola	extracellular	31.28	30.14
CDY34891	Canola	vacuole	26.54	29.47
CDX85858	Canola	extracellular	30.81	28.38

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	GO:A0A078C236	EnsemblPlants:CDX70935	ProteinID:CDX70935	ProteinID:CDX70935.1
InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145	GO:GO:0045735	EnsemblPlantsGene:GSBRNA2T00140846001
InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF92	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI0004EE4E33	SEG:seg	:	:	:

Description

BnaC03g10190D

Coordinates

chrLK031791:-:2824010..2824859

Molecular Weight (calculated)

21916.4 Da

IEP (calculated)

7.504

GRAVY (calculated)

0.318

Length

211 amino acids

Sequence
(BLAST)

001: MKMIIHIFFT LSLVSSISYS SVQDFCVADP KGPQSPSGYS CKNPDQVTEK DFAFSGLAKA GNTSNIIKAA VTPAFAPAFA GTNGLGVSIA RLDLATGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLERGDS MVFPQGLLHF QLNSGKGPAL AYVAFGSSSP GLQILSFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)

001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG

Arabidopsis Description

GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.