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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 5
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:extracellular
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY11392 Canola extracellular 94.09 94.09
AT3G62020.1 Thale cress extracellular, vacuole 93.18 93.18
CDX89983 Canola extracellular, vacuole 68.18 68.81
CDY15231 Canola extracellular, vacuole 67.73 68.35
VIT_07s0005g02380.t01 Wine grape extracellular 67.27 68.2
TraesCS3B01G200200.1 Wheat extracellular 68.18 68.18
KRH33687 Soybean extracellular 68.18 67.87
TraesCS3D01G176100.1 Wheat extracellular 67.73 67.73
TraesCS3A01G165500.1 Wheat extracellular 67.27 67.27
Os05t0277500-01 Rice extracellular 66.36 66.06
KRH33688 Soybean extracellular 65.45 65.45
TraesCS1D01G081700.1 Wheat extracellular 66.36 65.18
KRG96631 Soybean extracellular, vacuole 54.09 64.67
TraesCS1B01G098000.1 Wheat extracellular 66.36 64.6
TraesCS1A01G080000.1 Wheat extracellular 65.45 64.29
CDY50897 Canola extracellular 63.64 63.35
CDX93502 Canola extracellular 63.64 62.78
CDY20692 Canola extracellular 62.73 62.73
Os01t0249200-01 Rice extracellular 64.09 62.11
CDY31080 Canola extracellular 61.82 62.1
CDY06361 Canola extracellular 60.45 61.57
KRH69151 Soybean cytosol 42.73 61.44
CDY22633 Canola extracellular 59.55 60.65
EES02420 Sorghum extracellular 62.27 60.62
VIT_07s0005g02370.t01 Wine grape extracellular 59.55 60.37
EER95948 Sorghum extracellular 61.82 58.87
Zm00001d018954_P002 Maize extracellular 60.45 57.58
CDY05213 Canola extracellular 55.0 55.5
CDY18833 Canola extracellular 54.55 55.05
CDY05519 Canola extracellular 54.09 54.59
CDX74123 Canola extracellular 54.09 54.59
CDY19762 Canola extracellular 53.64 54.38
CDX87040 Canola extracellular 53.64 54.38
CDY49987 Canola extracellular 53.18 53.67
CDX80572 Canola extracellular 52.73 53.21
CDY61117 Canola extracellular 52.73 53.21
CDY05327 Canola vacuole 46.82 53.09
HORVU3Hr1G034100.2 Barley cytosol, plastid 63.64 53.03
CDY47579 Canola extracellular 45.45 52.63
CDY19265 Canola extracellular 46.82 48.13
CDY26706 Canola extracellular 45.91 47.2
CDX81907 Canola extracellular 45.91 47.2
CDY21688 Canola extracellular 45.91 47.2
KXG32174 Sorghum plastid 62.73 43.67
HORVU1Hr1G017170.1 Barley extracellular, plastid, vacuole 65.0 42.69
CDY51841 Canola extracellular, plasma membrane, vacuole 38.18 39.81
CDY22866 Canola extracellular 37.27 38.86
CDX92448 Canola extracellular 37.27 38.86
CDX85429 Canola extracellular 37.27 38.86
CDY45080 Canola extracellular, plasma membrane, vacuole 37.27 38.86
CDY16549 Canola extracellular 37.27 38.86
CDX70935 Canola extracellular, vacuole 36.82 38.39
CDY27880 Canola extracellular 36.36 37.74
CDY45077 Canola extracellular 36.36 37.74
CDX68260 Canola extracellular, vacuole 34.55 36.72
CDX68163 Canola extracellular 35.91 36.07
CDX72929 Canola vacuole 35.45 35.94
CDY11164 Canola extracellular, vacuole 33.64 35.75
CDY45079 Canola extracellular, vacuole 35.45 35.62
CDX96421 Canola vacuole 35.0 35.48
CDY34891 Canola vacuole 29.55 34.21
CDX85858 Canola extracellular 35.45 34.06
CDY22215 Canola extracellular 33.64 32.74
CDY41321 Canola extracellular 33.64 32.74
CDY07800 Canola vacuole 28.18 32.46
CDX82141 Canola vacuole 24.55 24.43
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078CKR0EnsemblPlants:CDX76609ProteinID:CDX76609ProteinID:CDX76609.1
InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0030145GO:GO:0045735EnsemblPlantsGene:GSBRNA2T00127067001
InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725
PANTHER:PTHR31238PANTHER:PTHR31238:SF18InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182
SignalP:SignalP-noTMUniParc:UPI0004EE86D2::::
Description
BnaC08g31950D
Coordinates
chrLK031808:-:185049..186028
Molecular Weight (calculated)
23446.2 Da
IEP (calculated)
9.413
GRAVY (calculated)
0.041
Length
220 amino acids
Sequence
(BLAST)
001: MDSRSYVFFF GLSSLTLIAL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSPVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS MAATLFTASP PIPDHVLTTA
201: FQIGTKEIEK IKSKLAPKKG
Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)
001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV
Arabidopsis Description
GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.