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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 6
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:extracellular, plasma membrane, vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:vacuole
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plasma membrane
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra006567.1-P Field mustard extracellular, plasma membrane, vacuole 99.53 99.53
CDX70935 Canola extracellular, vacuole 95.73 95.73
CDY45080 Canola extracellular, plasma membrane, vacuole 94.31 94.31
CDY22866 Canola extracellular 93.84 93.84
CDY16549 Canola extracellular 93.84 93.84
CDX92448 Canola extracellular 93.84 93.84
CDX85429 Canola extracellular 93.84 93.84
AT5G20630.1 Thale cress extracellular, plasma membrane, vacuole 93.36 93.36
CDY27880 Canola extracellular 77.73 77.36
CDY45077 Canola extracellular 77.73 77.36
CDY45079 Canola extracellular, vacuole 78.67 75.8
KRH02617 Soybean nucleus 69.67 70.67
KRH12528 Soybean extracellular 68.72 68.08
VIT_18s0086g00590.t01 Wine grape cytosol 39.34 67.48
PGSC0003DMT400036428 Potato extracellular 66.35 67.31
Solyc03g123410.1.1 Tomato nucleus 65.88 66.83
CDX68260 Canola extracellular, vacuole 65.4 66.67
PGSC0003DMT400030317 Potato extracellular 65.4 66.35
CDY11164 Canola extracellular, vacuole 64.45 65.7
VIT_09s0002g01330.t01 Wine grape cytosol, extracellular, nucleus 29.38 62.63
TraesCS2B01G090300.1 Wheat extracellular 61.14 60.85
TraesCS2D01G073700.1 Wheat extracellular 61.14 60.85
CDX96421 Canola vacuole 62.56 60.83
TraesCS7D01G180200.1 Wheat extracellular, vacuole 60.66 60.38
VIT_09s0002g01320.t01 Wine grape extracellular 59.72 60.29
TraesCS2A01G075000.1 Wheat extracellular 60.66 60.09
TraesCS7A01G178300.1 Wheat extracellular 60.19 59.91
TraesCS7B01G084000.1 Wheat plastid 60.19 59.91
VIT_18s0086g00410.t01 Wine grape extracellular 59.24 59.81
Os08t0460000-01 Rice extracellular 60.19 59.62
CDX72929 Canola vacuole 61.14 59.45
HORVU7Hr1G036720.1 Barley extracellular 59.72 59.43
TraesCS2D01G073600.1 Wheat extracellular 58.29 59.13
Zm00001d037513_P001 Maize plastid 57.82 57.55
KRH19305 Soybean cytosol, extracellular, plastid 58.77 57.14
VIT_07s0005g05920.t01 Wine grape extracellular 55.92 56.46
EES17780 Sorghum extracellular, vacuole 58.29 55.66
VIT_07s0005g05910.t01 Wine grape extracellular 54.5 55.02
VIT_07s0005g05930.t01 Wine grape extracellular 54.5 55.02
GSMUA_Achr9P16110_001 Banana plasma membrane, plastid, vacuole 64.45 53.12
VIT_12s0059g00740.t01 Wine grape cytosol 30.81 52.85
GSMUA_Achr2P18710_001 Banana extracellular 60.66 51.2
VIT_09s0002g01340.t01 Wine grape extracellular, vacuole 53.55 45.56
CDY22633 Canola extracellular 40.28 39.35
CDY06361 Canola extracellular 39.81 38.89
CDY11392 Canola extracellular 40.28 38.64
CDX93502 Canola extracellular 40.76 38.56
CDY50897 Canola extracellular 40.28 38.46
CDY20692 Canola extracellular 39.81 38.18
CDX76609 Canola extracellular 39.81 38.18
CDY19265 Canola extracellular 38.39 37.85
CDX81907 Canola extracellular 38.39 37.85
CDY21688 Canola extracellular 38.39 37.85
CDX87040 Canola extracellular 38.86 37.79
CDY15231 Canola extracellular, vacuole 38.86 37.61
CDY05519 Canola extracellular 38.86 37.61
CDX89983 Canola extracellular, vacuole 38.86 37.61
CDY19762 Canola extracellular 38.39 37.33
CDY18833 Canola extracellular 38.39 37.16
CDY61117 Canola extracellular 38.39 37.16
CDY05327 Canola vacuole 34.12 37.11
CDY31080 Canola extracellular 38.39 36.99
CDX80572 Canola extracellular 37.91 36.7
CDY26706 Canola extracellular 36.97 36.45
CDY47579 Canola extracellular 31.75 35.26
CDX82141 Canola vacuole 36.49 34.84
CDY05213 Canola extracellular 35.07 33.95
CDX74123 Canola extracellular 34.6 33.49
CDY49987 Canola extracellular 34.12 33.03
CDY41321 Canola extracellular 34.6 32.3
CDY22215 Canola extracellular 34.6 32.3
CDX68163 Canola extracellular 31.75 30.59
CDY07800 Canola vacuole 27.49 30.37
CDY34891 Canola vacuole 26.54 29.47
CDX85858 Canola extracellular 31.28 28.82
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078IPF4UniProt:A0A078IPF4EnsemblPlants:CDY51841ProteinID:CDY51841
ProteinID:CDY51841.1InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576
GO:GO:0030145GO:GO:0045735GO:GO:0046872EnsemblPlantsGene:GSBRNA2T00004321001InterPro:GerminInterPro:Germin_Mn-BS
InterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725PANTHER:PTHR31238PANTHER:PTHR31238:SF92
InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182SignalP:SignalP-noTMUniParc:UPI0004EE663F
SEG:seg:::::
Description
BnaA03g56080DBnaA03g56080D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IPF4]
Coordinates
chrLK033033:+:22932..23567
Molecular Weight (calculated)
21854.4 Da
IEP (calculated)
6.929
GRAVY (calculated)
0.383
Length
211 amino acids
Sequence
(BLAST)
001: MKMIIHIFFT LSLVSSISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFSGLAKA GNTSNIIKAA VTPAFAPTFA GINGLGVSLA RLDLASGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLEKGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILSFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N
Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)
001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N
Arabidopsis Description
GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.