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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 8
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:plastid, secretory
BaCelLo:secretory
EpiLoc:vacuole
iPSORT:secretory
MultiLoc:extracellular
Plant-mPloc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:extracellular
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra031671.1-P Field mustard extracellular 100.0 100.0
CDY22633 Canola extracellular 98.61 98.61
CDX93502 Canola extracellular 93.06 90.13
CDY50897 Canola extracellular 92.13 90.05
CDY20692 Canola extracellular 89.81 88.18
AT1G09560.1 Thale cress extracellular 89.35 88.13
CDY31080 Canola extracellular 88.43 87.21
GSMUA_Achr5P18440_001 Banana extracellular 68.98 68.04
GSMUA_Achr8P18750_001 Banana extracellular, vacuole 67.59 67.59
GSMUA_Achr1P25160_001 Banana extracellular 67.13 66.21
GSMUA_AchrUn_... Banana extracellular 66.2 65.6
TraesCS3A01G165500.1 Wheat extracellular 65.74 64.55
TraesCS3D01G176100.1 Wheat extracellular 65.28 64.09
TraesCS3B01G200200.1 Wheat extracellular 65.28 64.09
Os05t0277500-01 Rice extracellular 64.35 62.9
Os01t0249200-01 Rice extracellular 64.81 61.67
TraesCS1D01G081700.1 Wheat extracellular 63.43 61.16
TraesCS1A01G080000.1 Wheat extracellular 63.43 61.16
PGSC0003DMT400047067 Potato cytosol 59.72 61.14
EES02420 Sorghum extracellular 63.89 61.06
TraesCS1B01G098000.1 Wheat extracellular 63.89 61.06
PGSC0003DMT400047065 Potato cytosol, extracellular 59.26 60.95
CDX76609 Canola extracellular 61.57 60.45
CDX89983 Canola extracellular, vacuole 60.19 59.63
CDY11392 Canola extracellular 60.65 59.55
CDY15231 Canola extracellular, vacuole 59.72 59.17
GSMUA_Achr8P29820_001 Banana extracellular 62.96 59.13
Solyc01g102390.2.1 Tomato extracellular 60.19 59.09
Solyc01g102400.2.1 Tomato extracellular 60.19 59.09
CDY19762 Canola extracellular 58.8 58.53
CDX80572 Canola extracellular 58.8 58.26
Solyc01g102380.2.1 Tomato extracellular 60.19 58.04
CDY05519 Canola extracellular 58.33 57.8
CDX87040 Canola extracellular 57.87 57.6
CDY61117 Canola extracellular 57.87 57.34
Zm00001d018954_P002 Maize extracellular 60.65 56.71
CDY18833 Canola extracellular 56.94 56.42
EER95948 Sorghum extracellular 60.19 56.28
CDY05327 Canola vacuole 50.46 56.19
CDY05213 Canola extracellular 56.48 55.96
CDY47579 Canola extracellular 46.76 53.16
CDX74123 Canola extracellular 53.24 52.75
CDY49987 Canola extracellular 52.78 52.29
HORVU3Hr1G034100.2 Barley cytosol, plastid 61.11 50.0
CDX81907 Canola extracellular 46.3 46.73
CDY19265 Canola extracellular 46.3 46.73
CDY21688 Canola extracellular 45.83 46.26
CDY26706 Canola extracellular 45.37 45.79
KXG32174 Sorghum plastid 64.35 43.99
HORVU1Hr1G017170.1 Barley extracellular, plastid, vacuole 62.96 40.6
CDY51841 Canola extracellular, plasma membrane, vacuole 38.89 39.81
CDX70935 Canola extracellular, vacuole 38.43 39.34
CDX85429 Canola extracellular 37.96 38.86
CDX92448 Canola extracellular 37.96 38.86
CDY16549 Canola extracellular 37.96 38.86
CDY22866 Canola extracellular 37.96 38.86
CDY45080 Canola extracellular, plasma membrane, vacuole 37.96 38.86
CDY45077 Canola extracellular 37.96 38.68
CDY27880 Canola extracellular 37.96 38.68
CDY11164 Canola extracellular, vacuole 35.65 37.2
CDX68260 Canola extracellular, vacuole 35.65 37.2
CDX96421 Canola vacuole 37.04 36.87
CDY34891 Canola vacuole 32.41 36.84
CDY45079 Canola extracellular, vacuole 36.57 36.07
CDX68163 Canola extracellular 36.11 35.62
CDY07800 Canola vacuole 31.48 35.6
CDY22215 Canola extracellular 37.04 35.4
CDY41321 Canola extracellular 37.04 35.4
CDX72929 Canola vacuole 35.19 35.02
CDX85858 Canola extracellular 34.72 32.75
CDX82141 Canola vacuole 25.0 24.43
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1GO:A0A078EYY7EnsemblPlants:CDY06361ProteinID:CDY06361ProteinID:CDY06361.1
InterPro:Cupin_1GO:GO:0003674GO:GO:0005488GO:GO:0030145GO:GO:0045735EnsemblPlantsGene:GSBRNA2T00122297001
InterPro:GerminInterPro:Germin_Mn-BSInterPro:IPR014710PFAM:PF00190PRINTS:PR00325ScanProsite:PS00725
PANTHER:PTHR31238PANTHER:PTHR31238:SF39InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182
SignalP:SignalP-noTMUniParc:UPI0002543287::::
Description
BnaA09g48420D
Coordinates
chrLK031968:+:974444..975240
Molecular Weight (calculated)
22793.4 Da
IEP (calculated)
8.241
GRAVY (calculated)
0.151
Length
216 amino acids
Sequence
(BLAST)
001: MASPTPFLSI FLFFLITVSA DPDMLQDLCV ADLSSGIKVN GFPCKDAANV TSLDFFSQAL ANPGLTNNTF GALVTGANVM NLPGLNTLGV SLSRIDYAPG
101: GLNPPHTHPR ATEVVYVLEG TLDVGFLTTA NKLISRSLKK GDVFAFPKGL VHFQKNNGDV PASVIAAFNS QLPGTQSLGA TLFGSTPPVP DEILAQAFQT
201: SSGTVKHIKT RFQPKK
Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)
001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
Arabidopsis Description
GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.