Factsheet for GSMUA_Achr8P18750_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P18440_001	Banana	extracellular	88.89	87.67
GSMUA_Achr1P25160_001	Banana	extracellular	84.72	83.56
GSMUA_AchrUn_...	Banana	extracellular	82.41	81.65
GSMUA_Achr8P29820_001	Banana	extracellular	81.02	76.09
Os05t0277500-01	Rice	extracellular	75.93	74.21
VIT_14s0060g00120.t01	Wine grape	extracellular	72.69	72.35
KRH68383	Soybean	nucleus	72.69	72.02
TraesCS1D01G081700.1	Wheat	extracellular	74.07	71.43
KRG96655	Soybean	extracellular, vacuole	72.22	71.23
TraesCS1A01G080000.1	Wheat	extracellular	73.15	70.54
TraesCS3B01G200200.1	Wheat	extracellular	71.76	70.45
TraesCS1B01G098000.1	Wheat	extracellular	73.61	70.35
TraesCS3D01G176100.1	Wheat	extracellular	71.3	70.0
VIT_07s0005g02380.t01	Wine grape	extracellular	69.91	69.59
TraesCS3A01G165500.1	Wheat	extracellular	70.83	69.55
KRH33688	Soybean	extracellular	69.91	68.64
AT1G09560.1	Thale cress	extracellular	68.98	68.04
CDY06361	Canola	extracellular	67.59	67.59
Bra031671.1-P	Field mustard	extracellular	67.59	67.59
CDY31080	Canola	extracellular	68.52	67.58
CDY20692	Canola	extracellular	68.52	67.27
Bra030785.1-P	Field mustard	extracellular	68.52	67.27
KRH33715	Soybean	nucleus	69.44	67.26
CDY22633	Canola	extracellular	67.13	67.13
PGSC0003DMT400047065	Potato	cytosol, extracellular	64.81	66.67
Os01t0249200-01	Rice	extracellular	69.91	66.52
KRG90420	Soybean	extracellular, nucleus	68.98	66.52
KRH33687	Soybean	extracellular	68.06	66.52
PGSC0003DMT400047067	Potato	cytosol	64.81	66.35
EER95948	Sorghum	extracellular	70.83	66.23
KRG96631	Soybean	extracellular, vacuole	56.02	65.76
EES02420	Sorghum	extracellular	68.52	65.49
CDX93502	Canola	extracellular	67.13	65.02
Bra020014.1-P	Field mustard	extracellular	66.67	64.57
Zm00001d018954_P002	Maize	extracellular	68.98	64.5
CDY50897	Canola	extracellular	65.74	64.25
Solyc01g102390.2.1	Tomato	extracellular	65.28	64.09
Solyc01g102400.2.1	Tomato	extracellular	65.28	64.09
VIT_07s0005g02370.t01	Wine grape	extracellular	62.96	62.67
KRH69151	Soybean	cytosol	43.06	60.78
Solyc01g102380.2.1	Tomato	extracellular	62.5	60.27
HORVU3Hr1G034100.2	Barley	cytosol, plastid	65.74	53.79
GSMUA_Achr4P17250_001	Banana	extracellular	43.52	51.93
GSMUA_AchrUn_...	Banana	extracellular	37.5	50.62
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	73.15	47.16
KXG32174	Sorghum	plastid	68.98	47.15
GSMUA_Achr1P21920_001	Banana	endoplasmic reticulum, extracellular	38.89	35.29
GSMUA_Achr2P18710_001	Banana	extracellular	39.35	34.0
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	39.35	33.2

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr8G18750_001	EnsemblPlants:GSMUA_Achr8P18750_001
EnsemblPlants:GSMUA_Achr8T18750_001	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M0TRM8	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF39	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI000294EE9E	:	:

Description

Germin-like protein 5-1 [Source:GMGC_GENE;Acc:GSMUA_Achr8G18750_001]

Coordinates

chr8:+:23651080..23651994

Molecular Weight (calculated)

22732.6 Da

IEP (calculated)

9.635

GRAVY (calculated)

0.211

Length

216 amino acids

Sequence
(BLAST)

001: MAKPSLLTFF SLLVASTLAA DPDMLQDICV ADLNSAVKVN GFACKPAAEV TEADFFFQGL AKPGATNTTM GSLVTAANVE KIPGLNTLGV SMSRVDYAPG
101: GLNPPHTHPR ATEIVFVLDG TLDVGFITTA NKLITKTITK GDVFVFPRGL VHFQKNNGDV PAAALAAFNS QFPGTQSIAA TLFAATQPVP DIVLSKAFQI
201: GTRDVKKIKS RLAPKK

Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)

001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK

Arabidopsis Description

GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.