Factsheet for GSMUA_Achr5P18440_001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P18750_001	Banana	extracellular, vacuole	87.67	88.89
GSMUA_Achr1P25160_001	Banana	extracellular	82.65	82.65
GSMUA_AchrUn_...	Banana	extracellular	80.82	81.19
GSMUA_Achr8P29820_001	Banana	extracellular	79.45	75.65
Os05t0277500-01	Rice	extracellular	74.43	73.76
VIT_14s0060g00120.t01	Wine grape	extracellular	72.15	72.81
KRH68383	Soybean	nucleus	70.78	71.1
VIT_07s0005g02380.t01	Wine grape	extracellular	70.32	70.97
TraesCS1D01G081700.1	Wheat	extracellular	72.15	70.54
TraesCS3B01G200200.1	Wheat	extracellular	70.78	70.45
TraesCS1B01G098000.1	Wheat	extracellular	72.6	70.35
TraesCS1A01G080000.1	Wheat	extracellular	71.69	70.09
TraesCS3D01G176100.1	Wheat	extracellular	70.32	70.0
KRG96655	Soybean	extracellular, vacuole	69.86	69.86
TraesCS3A01G165500.1	Wheat	extracellular	69.86	69.55
KRH33715	Soybean	nucleus	70.78	69.51
KRG90420	Soybean	extracellular, nucleus	70.78	69.2
Bra031671.1-P	Field mustard	extracellular	68.04	68.98
CDY06361	Canola	extracellular	68.04	68.98
PGSC0003DMT400047067	Potato	cytosol	66.21	68.72
AT1G09560.1	Thale cress	extracellular	68.49	68.49
PGSC0003DMT400047065	Potato	cytosol, extracellular	65.3	68.1
CDY22633	Canola	extracellular	67.12	68.06
CDY20692	Canola	extracellular	68.04	67.73
Bra030785.1-P	Field mustard	extracellular	68.04	67.73
KRH33688	Soybean	extracellular	67.58	67.27
CDY31080	Canola	extracellular	67.12	67.12
EER95948	Sorghum	extracellular	70.78	67.1
CDX93502	Canola	extracellular	68.04	66.82
CDY50897	Canola	extracellular	67.12	66.52
Bra020014.1-P	Field mustard	extracellular	67.58	66.37
KRG96631	Soybean	extracellular, vacuole	55.71	66.3
KRH33687	Soybean	extracellular	66.67	66.06
Solyc01g102390.2.1	Tomato	extracellular	66.21	65.91
Solyc01g102400.2.1	Tomato	extracellular	65.75	65.45
Zm00001d018954_P002	Maize	extracellular	68.49	64.94
Os01t0249200-01	Rice	extracellular	67.12	64.76
EES02420	Sorghum	extracellular	65.3	63.27
VIT_07s0005g02370.t01	Wine grape	extracellular	62.56	63.13
KRH69151	Soybean	cytosol	41.55	59.48
Solyc01g102380.2.1	Tomato	extracellular	60.73	59.38
GSMUA_AchrUn_...	Banana	extracellular	39.73	54.38
GSMUA_Achr4P17250_001	Banana	extracellular	44.75	54.14
HORVU3Hr1G034100.2	Barley	cytosol, plastid	64.84	53.79
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	72.15	47.16
KXG32174	Sorghum	plastid	65.75	45.57
GSMUA_Achr1P21920_001	Banana	endoplasmic reticulum, extracellular	39.73	36.55
GSMUA_Achr2P18710_001	Banana	extracellular	37.9	33.2
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	36.99	31.64

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	EnsemblPlantsGene:GSMUA_Achr5G18440_001	EnsemblPlants:GSMUA_Achr5P18440_001
EnsemblPlants:GSMUA_Achr5T18440_001	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M0SZM3	PFAM:PF00190
PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF39	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI0002969553	SEG:seg	:

Description

Germin-like protein 5-1 [Source:GMGC_GENE;Acc:GSMUA_Achr5G18440_001]

Coordinates

chr5:+:19873567..19874465

Molecular Weight (calculated)

23029.8 Da

IEP (calculated)

8.749

GRAVY (calculated)

0.225

Length

219 amino acids

Sequence
(BLAST)

001: MATSSLVTIF SFLFLVSSNL AADPDMLQDI CVADLNAGVR VNGFACKPAA NVTEADFFFQ GLAKPGAATN TTMGSLVTAA NVEKIPGLNT LGVSMSRVDY
101: APGGLNPPHT HPRATEIVFV LEGTLDVGFI TTANKLIAKT ITKGDVFVFP RGLVHFQKNN ADVPAAALAA FNSQLPGTQS LAATLFAATP SVPDHVLTKA
201: FQIGTKEVEK IKSRLQPKK

Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)

001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV

Arabidopsis Description

GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.