Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 5
- golgi 5
- extracellular 8
- vacuole 4
- plasma membrane 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY06361 | Canola | extracellular | 88.13 | 89.35 |
| Bra031671.1-P | Field mustard | extracellular | 88.13 | 89.35 |
| CDY22633 | Canola | extracellular | 87.67 | 88.89 |
| CDY50897 | Canola | extracellular | 88.58 | 87.78 |
| CDX93502 | Canola | extracellular | 88.58 | 87.0 |
| Bra020014.1-P | Field mustard | extracellular | 88.13 | 86.55 |
| CDY20692 | Canola | extracellular | 85.39 | 85.0 |
| Bra030785.1-P | Field mustard | extracellular | 85.39 | 85.0 |
| CDY31080 | Canola | extracellular | 84.93 | 84.93 |
| GSMUA_Achr8P18750_001 | Banana | extracellular, vacuole | 68.04 | 68.98 |
| GSMUA_Achr5P18440_001 | Banana | extracellular | 68.49 | 68.49 |
| GSMUA_Achr1P25160_001 | Banana | extracellular | 68.04 | 68.04 |
| GSMUA_AchrUn_... | Banana | extracellular | 66.67 | 66.97 |
| TraesCS3A01G165500.1 | Wheat | extracellular | 65.3 | 65.0 |
| TraesCS3B01G200200.1 | Wheat | extracellular | 64.84 | 64.55 |
| TraesCS3D01G176100.1 | Wheat | extracellular | 64.84 | 64.55 |
| Os05t0277500-01 | Rice | extracellular | 63.93 | 63.35 |
| Os01t0249200-01 | Rice | extracellular | 64.84 | 62.56 |
| AT3G62020.1 | Thale cress | extracellular, vacuole | 62.56 | 62.27 |
| TraesCS1D01G081700.1 | Wheat | extracellular | 63.01 | 61.61 |
| EES02420 | Sorghum | extracellular | 63.47 | 61.5 |
| TraesCS1A01G080000.1 | Wheat | extracellular | 62.56 | 61.16 |
| PGSC0003DMT400047067 | Potato | cytosol | 58.9 | 61.14 |
| TraesCS1B01G098000.1 | Wheat | extracellular | 63.01 | 61.06 |
| PGSC0003DMT400047065 | Potato | cytosol, extracellular | 58.45 | 60.95 |
| GSMUA_Achr8P29820_001 | Banana | extracellular | 63.47 | 60.43 |
| AT5G26700.1 | Thale cress | extracellular, vacuole | 58.45 | 60.09 |
| Solyc01g102380.2.1 | Tomato | extracellular | 60.73 | 59.38 |
| Solyc01g102400.2.1 | Tomato | extracellular | 59.36 | 59.09 |
| Solyc01g102390.2.1 | Tomato | extracellular | 59.36 | 59.09 |
| AT3G05930.1 | Thale cress | extracellular | 58.45 | 58.45 |
| AT1G02335.1 | Thale cress | extracellular, vacuole | 58.45 | 58.45 |
| Zm00001d018954_P002 | Maize | extracellular | 59.82 | 56.71 |
| EER95948 | Sorghum | extracellular | 59.36 | 56.28 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 51.6 | 51.36 |
| HORVU3Hr1G034100.2 | Barley | cytosol, plastid | 61.19 | 50.76 |
| AT1G18980.1 | Thale cress | extracellular | 49.32 | 49.09 |
| KXG32174 | Sorghum | plastid | 63.47 | 43.99 |
| HORVU1Hr1G017170.1 | Barley | extracellular, plastid, vacuole | 62.56 | 40.9 |
| AT1G72610.1 | Thale cress | extracellular, vacuole | 38.36 | 40.38 |
| AT5G20630.1 | Thale cress | extracellular, plasma membrane, vacuole | 36.53 | 37.91 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 36.07 | 36.41 |
| AT1G74820.1 | Thale cress | extracellular | 37.44 | 36.12 |
| AT3G10080.2 | Thale cress | mitochondrion | 36.53 | 26.85 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:837482 | ProteinID:AAC33216.1 | ProteinID:AEE28461.1 | EMBL:AF324678 |
| EMBL:AF326875 | EMBL:AF339696 | ArrayExpress:AT1G09560 | EnsemblPlantsGene:AT1G09560 | RefSeq:AT1G09560 | TAIR:AT1G09560 |
| RefSeq:AT1G09560-TAIR-G | EnsemblPlants:AT1G09560.1 | TAIR:AT1G09560.1 | InterPro:Cupin_1 | Symbol:GLP5 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005634 | GO:GO:0006810 | GO:GO:0006950 | GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009409 |
| GO:GO:0009506 | GO:GO:0009628 | GO:GO:0009987 | GO:GO:0010497 | GO:GO:0030145 | GO:GO:0030312 |
| GO:GO:0045735 | GO:GO:0046872 | GO:GO:0048046 | GO:GO:2000280 | InterPro:Germin | InterPro:Germin_Mn-BS |
| InterPro:IPR014710 | RefSeq:NP_172427.1 | UniProt:P94014 | PFAM:PF00190 | PO:PO:0000013 | PO:PO:0000037 |
| PO:PO:0000230 | PO:PO:0000252 | PO:PO:0000293 | PO:PO:0001016 | PO:PO:0001054 | PO:PO:0001078 |
| PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 | PO:PO:0006085 | PO:PO:0007064 | PO:PO:0007095 |
| PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 |
| PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 |
| PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 |
| PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 | PO:PO:0020137 | PO:PO:0020149 |
| PO:PO:0025022 | PO:PO:0025281 | PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF39 |
| InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | EMBL:U75191 |
| EMBL:U75198 | EMBL:U75199 | EMBL:U75200 | UniParc:UPI0000162CE7 | SEG:seg | : |
Description
GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
Coordinates
chr1:+:3093644..3094954
Molecular Weight (calculated)
22869.6 Da
IEP (calculated)
8.749
GRAVY (calculated)
0.176
Length
219 amino acids
Sequence
(BLAST)
(BLAST)
001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.