Factsheet for AT3G05930.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 7
vacuole 5
plasma membrane 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY18833	Canola	extracellular	82.65	83.03
Bra040244.1-P	Field mustard	extracellular	82.19	82.57
CDY49987	Canola	extracellular	79.91	80.28
CDY05213	Canola	extracellular	79.91	80.28
CDX74123	Canola	extracellular	79.0	79.36
Bra001173.1-P	Field mustard	extracellular, vacuole	79.0	79.36
Bra031430.1-P	Field mustard	extracellular	68.04	79.26
Bra020798.1-P	Field mustard	extracellular	77.63	78.34
CDY47579	Canola	extracellular	67.58	77.89
AT5G26700.1	Thale cress	extracellular, vacuole	63.47	65.26
AT1G09560.1	Thale cress	extracellular	58.45	58.45
AT3G62020.1	Thale cress	extracellular, vacuole	56.16	55.91
AT1G02335.1	Thale cress	extracellular, vacuole	54.34	54.34
AT1G18980.1	Thale cress	extracellular	45.21	45.0
AT1G18970.1	Thale cress	extracellular, vacuole	44.29	44.09
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	37.9	39.34
AT1G74820.1	Thale cress	extracellular	39.73	38.33
AT1G72610.1	Thale cress	extracellular, vacuole	35.62	37.5
AT1G10460.1	Thale cress	extracellular, vacuole	32.42	32.72
AT3G10080.2	Thale cress	mitochondrion	37.44	27.52

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:819762	UniProt:A0A178V5V2	ProteinID:AAF23223.1	ProteinID:AAF26095.1
ProteinID:AEE74317.1	EMBL:AK175617	ArrayExpress:AT3G05930	EnsemblPlantsGene:AT3G05930	RefSeq:AT3G05930	TAIR:AT3G05930
RefSeq:AT3G05930-TAIR-G	EnsemblPlants:AT3G05930.1	TAIR:AT3G05930.1	Unigene:At.49606	EMBL:BT028993	InterPro:Cupin_1
Symbol:GLP8	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618
GO:GO:0005623	GO:GO:0006810	GO:GO:0007275	GO:GO:0008150	GO:GO:0009506	GO:GO:0009987
GO:GO:0010497	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872	GO:GO:0048046
GO:GO:2000280	InterPro:Germin	InterPro:IPR014710	RefSeq:NP_187244.1	ProteinID:OAP01266.1	UniProt:P93000
PFAM:PF00190	PO:PO:0000293	PO:PO:0001016	PO:PO:0001017	PO:PO:0001185	PO:PO:0007611
PO:PO:0007616	PO:PO:0009009	PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032
PO:PO:0009046	PO:PO:0025022	PO:PO:0025195	PO:PO:0025281	PRINTS:PR00325	PANTHER:PTHR31238
PANTHER:PTHR31238:SF18	UniProt:Q681K0	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	EMBL:U75207	UniParc:UPI000012B4DC	:	:	:

Description

GLP8Germin-like protein subfamily 2 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P93000]

Coordinates

chr3:+:1770337..1771409

Molecular Weight (calculated)

23034.0 Da

IEP (calculated)

9.136

GRAVY (calculated)

0.189

Length

219 amino acids

Sequence
(BLAST)

001: MATSMIPIFV TFMLVAAHMA LADTNMLQDF CVADLSNGLK VNGYPCKDPA KVTPEDFYFI GLATAAATAN SSMGSAVTGA NVEKVPGLNT LGVSISRIDY
101: APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
201: FGAAAPEIQK IKGKFPPKK

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.