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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 9
  • endoplasmic reticulum 5
  • vacuole 6
  • plasma membrane 5
  • golgi 5
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY05213 Canola extracellular 96.31 95.87
Bra001173.1-P Field mustard extracellular, vacuole 84.79 84.4
Bra040244.1-P Field mustard extracellular 80.65 80.28
Bra031430.1-P Field mustard extracellular 67.28 77.66
AT3G05930.1 Thale cress extracellular 78.34 77.63
Bra009907.1-P Field mustard cytosol 53.0 62.5
Bra020528.1-P Field mustard extracellular 60.83 60.55
Bra036586.1-P Field mustard extracellular 59.45 59.45
Bra031671.1-P Field mustard extracellular 55.3 55.56
Bra030785.1-P Field mustard extracellular 54.38 53.64
Bra020014.1-P Field mustard extracellular 54.84 53.36
Bra007652.1-P Field mustard extracellular 53.92 53.18
Bra033314.1-P Field mustard extracellular, vacuole 52.53 52.29
Bra031058.1-P Field mustard extracellular 41.47 42.06
Bra025704.1-P Field mustard extracellular 41.47 42.06
Bra003784.1-P Field mustard extracellular 38.71 38.36
Bra020115.1-P Field mustard extracellular 35.48 36.32
Bra006567.1-P Field mustard extracellular, plasma membrane, vacuole 35.02 36.02
Bra020113.1-P Field mustard extracellular, plasma membrane, vacuole 35.02 36.02
Bra002316.1-P Field mustard extracellular 34.1 35.07
Bra016047.1-P Field mustard vacuole 35.02 35.02
Bra003874.1-P Field mustard extracellular 33.18 34.78
Bra020114.1-P Field mustard extracellular, vacuole 34.1 33.79
Bra031713.1-P Field mustard vacuole 29.49 33.68
Bra034093.1-P Field mustard extracellular 32.26 30.97
Protein Annotations
Gene3D:2.60.120.10MapMan:35.1EnsemblPlantsGene:Bra020798EnsemblPlants:Bra020798.1EnsemblPlants:Bra020798.1-PInterPro:Cupin_1
GO:GO:0003674GO:GO:0005488GO:GO:0005575GO:GO:0005576GO:GO:0030145GO:GO:0045735
GO:GO:0046872InterPro:GerminInterPro:IPR014710UniProt:M4DWA4PFAM:PF00190PRINTS:PR00325
PANTHER:PTHR31238PANTHER:PTHR31238:SF18InterPro:RmlC-like_jellyrollInterPro:RmlC_Cupin_sfSMART:SM00835SUPFAM:SSF51182
SignalP:SignalP-noTMUniParc:UPI0002545D79::::
Description
AT3G05930 (E=1e-095) GLP8 | GLP8 (GERMIN-LIKE PROTEIN 8); manganese ion binding / nutrient reservoir
Coordinates
chrA02:+:23089583..23090328
Molecular Weight (calculated)
23041.8 Da
IEP (calculated)
8.241
GRAVY (calculated)
-0.024
Length
217 amino acids
Sequence
(BLAST)
001: MAVSMTHLLV TIMLLAAHSA FAETNMLQDL CVADLKGSKV NGYPCKDPSQ VTPEDFYYMG LANAADTSNT SMGSAVTAGN VEKIPGLNMM GTSMSRIDYA
101: PGGLTPPHLH PRASEAIFVL EGSLFVGFLT TSGKLISKHV KKGDVFAFPR ALLHFQQNPN KTPASVIAAF DSQNPGTQSV GPSLFGANPP IPDDLLAKAF
201: SLGTNEIQNI KGKFQKK
Best Arabidopsis Sequence Match ( AT3G05930.1 )
(BLAST)
001: MATSMIPIFV TFMLVAAHMA LADTNMLQDF CVADLSNGLK VNGYPCKDPA KVTPEDFYFI GLATAAATAN SSMGSAVTGA NVEKVPGLNT LGVSISRIDY
101: APGGLNPPHL HPRASEAIFV LEGRLFVGFL TTTGKLISKH VNKGDVFVFP KALLHFQQNP NKAPASVLAA FDSQLPGTQV VGPSLFGSNP PIPDDLLAKA
201: FGAAAPEIQK IKGKFPPKK
Arabidopsis Description
GLP8Germin-like protein subfamily 2 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P93000]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.