Factsheet for Bra031430.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY47579	Canola	extracellular	98.4	97.37
Bra040244.1-P	Field mustard	extracellular	92.02	79.36
Bra001173.1-P	Field mustard	extracellular, vacuole	80.85	69.72
AT3G05930.1	Thale cress	extracellular	79.26	68.04
Bra020798.1-P	Field mustard	extracellular	77.66	67.28
Bra036586.1-P	Field mustard	extracellular	58.51	50.69
Bra009907.1-P	Field mustard	cytosol	49.47	50.54
Bra020528.1-P	Field mustard	extracellular	57.98	50.0
Bra031671.1-P	Field mustard	extracellular	54.26	47.22
Bra007652.1-P	Field mustard	extracellular	53.72	45.91
Bra020014.1-P	Field mustard	extracellular	54.26	45.74
Bra030785.1-P	Field mustard	extracellular	52.66	45.0
Bra033314.1-P	Field mustard	extracellular, vacuole	48.4	41.74
Bra025704.1-P	Field mustard	extracellular	42.55	37.38
Bra031058.1-P	Field mustard	extracellular	42.02	36.92
Bra003784.1-P	Field mustard	extracellular	38.83	33.33
Bra020115.1-P	Field mustard	extracellular	36.7	32.55
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	36.17	32.23
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	36.17	32.23
Bra031713.1-P	Field mustard	vacuole	32.45	32.11
Bra002316.1-P	Field mustard	extracellular	35.11	31.28
Bra020114.1-P	Field mustard	extracellular, vacuole	34.04	29.22
Bra003874.1-P	Field mustard	extracellular	31.38	28.5
Bra034093.1-P	Field mustard	extracellular	33.51	27.88
Bra016047.1-P	Field mustard	vacuole	31.91	27.65

Protein Annotations

EnsemblPlants:Bra031430.1	EnsemblPlants:Bra031430.1-P	EnsemblPlantsGene:Bra031430	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0045735
InterPro:Cupin_1	InterPro:IPR014710	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF18
PFAM:PF00190	SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	TMHMM:TMhelix
UniParc:UPI000254503A	UniProt:M4ERK4	MapMan:35.1	:	:	:

Description

AT3G05930 (E=2e-053) GLP8 | GLP8 (GERMIN-LIKE PROTEIN 8); manganese ion binding / nutrient reservoir

Coordinates

chrA01:-:17518940..17520167

Molecular Weight (calculated)

20085.3 Da

IEP (calculated)

8.051

GRAVY (calculated)

0.053

Length

188 amino acids

Sequence
(BLAST)

001: MATSIIYLIV TILLVAADTA FAESNMLQDF CVADLKGEKV NGYRCKDPAQ VTPEDFYCLA NAASTTNTTL GSAVTSANVE KIPGLNTLGV SMSRVDYAPG
101: GLNPPHLHPR ASEAIFVLEG RLFVGFLTTT GKLIYKHVNK GSQNPGAQGV GLSLFGANPP IPDDLLAKAF YLEPQEIQKV KGKFPIKK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.