Factsheet for Bra003784.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68163	Canola	extracellular	98.63	98.63
CDX85858	Canola	extracellular	91.32	87.34
AT1G74820.1	Thale cress	extracellular	77.63	74.89
Bra031058.1-P	Field mustard	extracellular	52.05	53.27
Bra025704.1-P	Field mustard	extracellular	51.14	52.34
PGSC0003DMT400063164	Potato	vacuole	47.49	47.27
Solyc03g113570.1.1	Tomato	vacuole	47.03	46.82
PGSC0003DMT400063166	Potato	vacuole	44.75	45.16
Solyc03g113580.1.1	Tomato	vacuole	44.29	44.7
Os03t0804700-00	Rice	plastid	42.92	41.78
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	42.92	40.87
TraesCS5A01G453200.1	Wheat	extracellular	42.47	40.43
TraesCS5D01G464000.1	Wheat	extracellular	42.47	40.43
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	42.01	40.35
Zm00001d034514_P001	Maize	extracellular	41.1	39.47
Bra031430.1-P	Field mustard	extracellular	33.33	38.83
Bra020798.1-P	Field mustard	extracellular	38.36	38.71
Bra040244.1-P	Field mustard	extracellular	38.36	38.53
EER93258	Sorghum	endoplasmic reticulum, extracellular	40.64	38.2
Os03t0804500-01	Rice	extracellular	39.73	37.34
Bra001173.1-P	Field mustard	extracellular, vacuole	36.07	36.24
Bra033314.1-P	Field mustard	extracellular, vacuole	36.07	36.24
Bra031671.1-P	Field mustard	extracellular	35.16	35.65
Bra020014.1-P	Field mustard	extracellular	36.07	35.43
Bra007652.1-P	Field mustard	extracellular	35.16	35.0
Bra030785.1-P	Field mustard	extracellular	34.25	34.09
Bra036586.1-P	Field mustard	extracellular	33.33	33.64
Bra020528.1-P	Field mustard	extracellular	33.33	33.49
Bra034093.1-P	Field mustard	extracellular	33.79	32.74
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	43.38	32.65
Bra020115.1-P	Field mustard	extracellular	31.51	32.55
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	31.05	32.23
Bra009907.1-P	Field mustard	cytosol	26.94	32.07
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.59	31.75
Bra003874.1-P	Field mustard	extracellular	29.68	31.4
Bra002316.1-P	Field mustard	extracellular	30.14	31.28
Bra016047.1-P	Field mustard	vacuole	30.14	30.41
Bra020114.1-P	Field mustard	extracellular, vacuole	29.68	29.68
Bra031713.1-P	Field mustard	vacuole	22.83	26.32

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra003784	EnsemblPlants:Bra003784.1	EnsemblPlants:Bra003784.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:M4CHV1	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI0002541649	SEG:seg	:	:	:

Description

AT1G74820 (E=8e-085) | cupin family protein

Coordinates

chrA07:+:15041756..15042415

Molecular Weight (calculated)

23457.4 Da

IEP (calculated)

6.087

GRAVY (calculated)

0.210

Length

219 amino acids

Sequence
(BLAST)

001: MANVPQISSS ILLTLCFTLF TTPALSDYLN PLQDFCVADL QATPSNTGYP CKSQVTSEDF FYSGLGTPLN TSNPKGVAAN RANLMTFPGL NTMGISMYNV
101: AVAAGVANPP HSHPGVTEAG IVVEGSVLIG FLTNNYTLYS KVAGPGDMFV IPPGLIHYEM NVGKTEARLL TVVASEWPSE VLVPHTLFLA KPAIPDFVLE
201: KIFKTDGKTI NMLRTKLTN

Best Arabidopsis Sequence Match ( AT1G74820.1 )
(BLAST)

001: MAHISQISSF LSIVLIFLAL CITLFTNPTL SLPALKLNPF QDFCVADLQA TPTNSGYPCK SQVTSEDFFY SGLNTPLNTS NPKGIAANPA NLLTFPGLNT
101: LGISMYNVAI APGGYNQPHS HPGVTEAGVV IEGSVLVGFL TTNYTLYSKV IGPGDMFVIP PGLIHYEGNV GKTQCRLLTV VADDLPSEVG VPHTLLATKP
201: AIPNEVLISA FKADSKTINM LRSKFTA

Arabidopsis Description

Germin-like protein subfamily T member 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S772]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.