Factsheet for Bra007652.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY11392	Canola	extracellular	99.55	99.55
AT3G62020.1	Thale cress	extracellular, vacuole	94.55	94.55
Bra033314.1-P	Field mustard	extracellular, vacuole	69.09	69.72
VIT_07s0005g02380.t01	Wine grape	extracellular	67.27	68.2
TraesCS3D01G176100.1	Wheat	extracellular	67.73	67.73
TraesCS3B01G200200.1	Wheat	extracellular	67.73	67.73
KRH33687	Soybean	extracellular	67.73	67.42
Os05t0277500-01	Rice	extracellular	66.82	66.52
TraesCS3A01G165500.1	Wheat	extracellular	66.36	66.36
KRH33688	Soybean	extracellular	65.45	65.45
TraesCS1D01G081700.1	Wheat	extracellular	65.91	64.73
TraesCS1B01G098000.1	Wheat	extracellular	65.91	64.16
KRG96631	Soybean	extracellular, vacuole	53.64	64.13
TraesCS1A01G080000.1	Wheat	extracellular	65.0	63.84
Os01t0249200-01	Rice	extracellular	65.0	63.0
Bra030785.1-P	Field mustard	extracellular	61.82	61.82
KRH69151	Soybean	cytosol	42.73	61.44
Bra020014.1-P	Field mustard	extracellular	62.27	61.44
Bra031671.1-P	Field mustard	extracellular	59.55	60.65
EES02420	Sorghum	extracellular	62.27	60.62
VIT_07s0005g02370.t01	Wine grape	extracellular	59.09	59.91
EER95948	Sorghum	extracellular	62.27	59.31
Zm00001d018954_P002	Maize	extracellular	61.36	58.44
Bra009907.1-P	Field mustard	cytosol	47.73	57.07
Bra040244.1-P	Field mustard	extracellular	54.55	55.05
Bra001173.1-P	Field mustard	extracellular, vacuole	53.64	54.13
Bra020798.1-P	Field mustard	extracellular	53.18	53.92
Bra031430.1-P	Field mustard	extracellular	45.91	53.72
Bra036586.1-P	Field mustard	extracellular	52.73	53.46
Bra020528.1-P	Field mustard	extracellular	52.73	53.21
HORVU3Hr1G034100.2	Barley	cytosol, plastid	63.64	53.03
Bra031058.1-P	Field mustard	extracellular	46.36	47.66
Bra025704.1-P	Field mustard	extracellular	45.45	46.73
KXG32174	Sorghum	plastid	62.73	43.67
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	65.45	42.99
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	38.64	40.28
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	37.73	39.34
Bra002316.1-P	Field mustard	extracellular	37.73	39.34
Bra020115.1-P	Field mustard	extracellular	36.82	38.21
Bra003874.1-P	Field mustard	extracellular	34.09	36.23
Bra020114.1-P	Field mustard	extracellular, vacuole	35.91	36.07
Bra016047.1-P	Field mustard	vacuole	35.0	35.48
Bra003784.1-P	Field mustard	extracellular	35.0	35.16
Bra031713.1-P	Field mustard	vacuole	29.55	34.21
Bra034093.1-P	Field mustard	extracellular	34.09	33.19

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra007652	EnsemblPlants:Bra007652.1	EnsemblPlants:Bra007652.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0009505	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:Germin_Mn-BS	InterPro:IPR014710	UniProt:M4CTV8	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF18	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002542A51	:	:	:

Description

AT3G62020 (E=6e-117) GLP10 | GLP10 (GERMIN-LIKE PROTEIN 10); manganese ion binding / nutrient reservoir

Coordinates

chrA09:-:30282759..30283534

Molecular Weight (calculated)

23464.4 Da

IEP (calculated)

9.150

GRAVY (calculated)

0.132

Length

220 amino acids

Sequence
(BLAST)

001: MDTRCYGFFF VLLSLAVISL AYDPDTLQDL CVADRTSGIK VNGFICKPES NITASDFFFA GISKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS MAATLFTASP AIPDHVLTTA
201: FQIGTKEIEK IKSKLAPKKG

Best Arabidopsis Sequence Match ( AT3G62020.1 )
(BLAST)

001: MDSRCFGFFF TLLSLNVIVL AYDPDTLQDL CVADRTSGIK VNGFTCKPES NITASDFFFA GIGKPAVVNN TVGSAVTGAN VEKIAGLNTL GVSLARIDYA
101: PGGLNPPHTH PRATEVIFVL EGELDVGFIT TANKLFAKTV KKGEVFVFPR GLIHYQKNND KAKPASVISA FNSQLPGTQS IAATLFTATP AIPDHVLTTT
201: FQIGTKEIEK IKSKFAPKKV

Arabidopsis Description

GLP10At3g62020 [Source:UniProtKB/TrEMBL;Acc:A0JQ09]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.