Factsheet for Bra025704.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19265	Canola	extracellular	95.79	95.79
CDY26706	Canola	extracellular	95.33	95.33
Bra031058.1-P	Field mustard	extracellular	88.78	88.78
AT1G18970.1	Thale cress	extracellular, vacuole	81.78	79.55
PGSC0003DMT400063166	Potato	vacuole	62.15	61.29
Solyc03g113580.1.1	Tomato	vacuole	61.22	60.37
PGSC0003DMT400063164	Potato	vacuole	60.75	59.09
Solyc03g113570.1.1	Tomato	vacuole	59.81	58.18
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	56.07	52.63
Bra003784.1-P	Field mustard	extracellular	52.34	51.14
Os03t0804700-00	Rice	plastid	51.4	48.89
Zm00001d034514_P001	Maize	extracellular	50.47	47.37
Bra030785.1-P	Field mustard	extracellular	48.6	47.27
EER93258	Sorghum	endoplasmic reticulum, extracellular	50.47	46.35
Os03t0804500-01	Rice	extracellular	50.47	46.35
Bra031671.1-P	Field mustard	extracellular	46.26	45.83
Bra020014.1-P	Field mustard	extracellular	47.66	45.74
Bra007652.1-P	Field mustard	extracellular	46.73	45.45
Bra033314.1-P	Field mustard	extracellular, vacuole	46.26	45.41
TraesCS5D01G464000.1	Wheat	extracellular	48.6	45.22
TraesCS5A01G453200.1	Wheat	extracellular	48.6	45.22
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	48.6	45.22
Bra040244.1-P	Field mustard	extracellular	44.39	43.58
Bra031430.1-P	Field mustard	extracellular	37.38	42.55
Bra009907.1-P	Field mustard	cytosol	36.45	42.39
Bra001173.1-P	Field mustard	extracellular, vacuole	42.99	42.2
Bra020798.1-P	Field mustard	extracellular	42.06	41.47
Bra020528.1-P	Field mustard	extracellular	41.59	40.83
Bra036586.1-P	Field mustard	extracellular	39.72	39.17
Bra003874.1-P	Field mustard	extracellular	37.38	38.65
Bra034093.1-P	Field mustard	extracellular	39.72	37.61
Bra016047.1-P	Field mustard	vacuole	37.38	36.87
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	35.98	36.49
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	49.07	36.08
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	35.51	36.02
Bra020115.1-P	Field mustard	extracellular	35.51	35.85
Bra002316.1-P	Field mustard	extracellular	35.05	35.55
Bra031713.1-P	Field mustard	vacuole	29.91	33.68
Bra020114.1-P	Field mustard	extracellular, vacuole	33.64	32.88

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EnsemblPlantsGene:Bra025704	EnsemblPlants:Bra025704.1	EnsemblPlants:Bra025704.1-P	InterPro:Cupin_1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735
GO:GO:0046872	InterPro:Germin	InterPro:IPR014710	UniProt:M4EA96	PFAM:PF00190	PRINTS:PR00325
PANTHER:PTHR31238	PANTHER:PTHR31238:SF46	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI000253F4D6	:	:	:	:

Description

AT1G18980 (E=1e-107) | germin-like protein, putative

Coordinates

chrA06:-:7394344..7394988

Molecular Weight (calculated)

22462.9 Da

IEP (calculated)

6.236

GRAVY (calculated)

0.312

Length

214 amino acids

Sequence
(BLAST)

001: MASLFTSILL TLCLFVVPSF SSDPDPLQDY CVGDLRASPS INGFPCKSLV SASDFFFSGL GGPLNTSNPN GVAISPANVL TFPGLNTLGL SMNNVEFAPG
101: GVNPPHSHPR ASEAGVVIEG SVFVGFLTTN NTLFSKVINA GEMFVVPRGL VHFQWNAGEG KARLITAFNS QLPGAVVLPS TLFGSVPEIP NAVLTKTFRT
201: DDATVNNLKS KFAV

Best Arabidopsis Sequence Match ( AT1G18980.1 )
(BLAST)

001: MTTLQISSSL FRSFLLVICV FVIPSLSSDS DPLQDFCVGD LKASPSINGF PCKSSVSASD FFFSGLGGPL NTSTPNGVAV SPANVLTFPG LNTLGLSMNN
101: VEFAPGGVNP PHSHPRATEA GVVIEGSVFV GFLTTNNTLF SKVLNAGEMF VVPRGLVHFQ WNVGKVKARL ITSFNSQLPG SAVLPSTLFG SNPTIPNAVL
201: TKTFRTDDVT VNKLKSKFAV

Arabidopsis Description

At1g18980 [Source:UniProtKB/TrEMBL;Acc:Q29PR5]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.