Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- mitochondrion 2
- vacuole 1
- extracellular 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5D01G464000.1 | Wheat | extracellular | 73.88 | 93.48 |
| TraesCS5A01G453200.1 | Wheat | extracellular | 73.88 | 93.48 |
| TraesCS5B01G462200.1 | Wheat | extracellular, vacuole | 73.2 | 92.61 |
| Os03t0804500-01 | Rice | extracellular | 58.08 | 72.53 |
| Zm00001d034514_P001 | Maize | extracellular | 55.33 | 70.61 |
| EER93258 | Sorghum | endoplasmic reticulum, extracellular | 55.33 | 69.1 |
| PGSC0003DMT400063164 | Potato | vacuole | 39.86 | 52.73 |
| PGSC0003DMT400063166 | Potato | vacuole | 39.18 | 52.53 |
| Solyc03g113570.1.1 | Tomato | vacuole | 39.52 | 52.27 |
| Solyc03g113580.1.1 | Tomato | vacuole | 38.49 | 51.61 |
| VIT_17s0000g05360.t01 | Wine grape | endoplasmic reticulum, extracellular | 39.52 | 50.44 |
| CDY19265 | Canola | extracellular | 36.77 | 50.0 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 37.46 | 49.55 |
| CDY26706 | Canola | extracellular | 36.43 | 49.53 |
| CDY21688 | Canola | extracellular | 36.08 | 49.07 |
| CDX81907 | Canola | extracellular | 36.08 | 49.07 |
| Bra031058.1-P | Field mustard | extracellular | 36.08 | 49.07 |
| Bra025704.1-P | Field mustard | extracellular | 36.08 | 49.07 |
| HORVU4Hr1G005380.1 | Barley | extracellular | 37.46 | 48.66 |
| AT1G18980.1 | Thale cress | extracellular | 36.77 | 48.64 |
| HORVU3Hr1G107860.1 | Barley | extracellular | 36.77 | 47.56 |
| HORVU3Hr1G107830.1 | Barley | extracellular | 36.43 | 47.11 |
| HORVU6Hr1G089510.1 | Barley | extracellular | 34.36 | 46.3 |
| HORVU3Hr1G107930.1 | Barley | extracellular | 35.74 | 46.22 |
| HORVU6Hr1G089570.3 | Barley | extracellular, vacuole | 35.05 | 46.15 |
| HORVU4Hr1G005540.1 | Barley | extracellular | 36.43 | 46.09 |
| HORVU4Hr1G005440.3 | Barley | extracellular | 36.77 | 45.53 |
| HORVU6Hr1G089450.1 | Barley | extracellular | 32.65 | 43.98 |
| CDX68163 | Canola | extracellular | 32.99 | 43.84 |
| Bra003784.1-P | Field mustard | extracellular | 32.65 | 43.38 |
| HORVU3Hr1G107870.1 | Barley | extracellular | 32.65 | 42.99 |
| AT1G74820.1 | Thale cress | extracellular | 32.3 | 41.41 |
| CDX85858 | Canola | extracellular | 31.62 | 40.17 |
| HORVU3Hr1G107910.2 | Barley | mitochondrion, vacuole | 34.02 | 39.92 |
| HORVU3Hr1G066330.1 | Barley | extracellular, mitochondrion, vacuole | 35.74 | 39.39 |
| HORVU6Hr1G005420.1 | Barley | extracellular | 30.24 | 38.6 |
| HORVU3Hr1G034100.2 | Barley | cytosol, plastid | 34.36 | 37.88 |
| HORVU7Hr1G036720.1 | Barley | extracellular | 27.49 | 37.74 |
| HORVU0Hr1G023590.1 | Barley | extracellular, vacuole | 27.15 | 35.75 |
| HORVU6Hr1G066380.1 | Barley | extracellular, vacuole | 27.49 | 35.71 |
| HORVU2Hr1G127670.1 | Barley | extracellular, vacuole | 26.46 | 34.68 |
| HORVU2Hr1G127660.1 | Barley | cytosol | 24.74 | 33.64 |
| HORVU1Hr1G017170.1 | Barley | extracellular, plastid, vacuole | 36.43 | 31.64 |
| HORVU4Hr1G076480.3 | Barley | vacuole | 24.05 | 29.79 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | UniProt:A0A287SNU2 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | InterPro:Germin |
| InterPro:Germin_Mn-BS | EnsemblPlantsGene:HORVU5Hr1G109190 | EnsemblPlants:HORVU5Hr1G109190.1 | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 |
| ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF46 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 |
| SUPFAM:SSF51182 | UniParc:UPI000B4748BC | SEG:seg | : | : | : |
Description
No Description!
Coordinates
chrchr5H:+:629295132..629296380
Molecular Weight (calculated)
30606.5 Da
IEP (calculated)
7.721
GRAVY (calculated)
0.175
Length
291 amino acids
Sequence
(BLAST)
(BLAST)
001: HVSVQVTRYF SELLNPSTPL TFVPSQLSPL YIAIIPDHRD STTTRTHQRY ISISHQSSPM ARSRASTMSS PVHRLLIVAA AAALVSACAA DPEPVQDFCV
101: AAVTNGSADH PSYPGFPCKP ASAVVSDDFF FAGLAKSGAA EAAESPFGSS VTPGNVAAFP GLNTLGVSIN RVDLAPGGVN PLHSHPRAAE LVHVVAGQML
201: VGFVSTAGTF YSKVVREGES FVIPRGLVHF QFNTGKEAAR AVTVFNSQLP GVVLAAPSLF GADPEIPDAV LAKSFQVDGE IIKLLKSKFR N
101: AAVTNGSADH PSYPGFPCKP ASAVVSDDFF FAGLAKSGAA EAAESPFGSS VTPGNVAAFP GLNTLGVSIN RVDLAPGGVN PLHSHPRAAE LVHVVAGQML
201: VGFVSTAGTF YSKVVREGES FVIPRGLVHF QFNTGKEAAR AVTVFNSQLP GVVLAAPSLF GADPEIPDAV LAKSFQVDGE IIKLLKSKFR N
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.