Factsheet for HORVU3Hr1G107870.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCSU01G057600.1	Wheat	extracellular	83.26	85.98
TraesCS3D01G490400.1	Wheat	extracellular	83.26	85.19
HORVU3Hr1G107860.1	Barley	extracellular	80.09	78.67
HORVU3Hr1G107830.1	Barley	extracellular	79.19	77.78
HORVU3Hr1G107930.1	Barley	extracellular	77.38	76.0
EES02060	Sorghum	extracellular	66.52	65.62
Zm00001d042082_P001	Maize	extracellular	59.73	63.46
Zm00001d011853_P001	Maize	extracellular	64.71	63.27
EES04228	Sorghum	extracellular	63.8	62.67
HORVU6Hr1G089570.3	Barley	extracellular, vacuole	58.82	58.82
HORVU6Hr1G089510.1	Barley	extracellular	57.47	58.8
HORVU3Hr1G107910.2	Barley	mitochondrion, vacuole	61.09	54.44
HORVU6Hr1G089450.1	Barley	extracellular	52.94	54.17
HORVU4Hr1G005540.1	Barley	extracellular	46.15	44.35
HORVU4Hr1G005380.1	Barley	extracellular	44.8	44.2
HORVU4Hr1G005440.3	Barley	extracellular	45.25	42.55
HORVU3Hr1G034100.2	Barley	cytosol, plastid	48.87	40.91
HORVU7Hr1G036720.1	Barley	extracellular	36.65	38.21
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	52.94	34.93
HORVU0Hr1G023590.1	Barley	extracellular, vacuole	33.94	33.94
HORVU6Hr1G066380.1	Barley	extracellular, vacuole	33.94	33.48
HORVU2Hr1G127670.1	Barley	extracellular, vacuole	33.48	33.33
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	39.82	33.33
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	42.99	32.65
HORVU6Hr1G005420.1	Barley	extracellular	33.48	32.46
HORVU2Hr1G127660.1	Barley	cytosol	30.32	31.31
HORVU4Hr1G076480.3	Barley	vacuole	30.77	28.94

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A287MLL5	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:Germin_Mn-BS	EnsemblPlantsGene:HORVU3Hr1G107870	EnsemblPlants:HORVU3Hr1G107870.1	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000B47A216	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:+:673726217..673727271

Molecular Weight (calculated)

23168.8 Da

IEP (calculated)

4.905

GRAVY (calculated)

0.186

Length

221 amino acids

Sequence
(BLAST)

001: MAPKQLPAVL LAACATLLAL AAPLLAGDPD MLQDFCVADY KSLDGPLRLN GFPCKRTEST MANDFFSDVL SVPGNTGGNP SGSATTAANV EKVPGLNTLG
101: VSMSRVDYAP WGTNPPHTHP RASEILFVVD GSLDVGFVTS SGKFFGRTVC KGEMFVFPRG LVHFQRNNNG SPAAAILAFN SQLPGTQKLA DALFTASPLV
201: PADVLARALD VDDCMVEPCV I

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.