Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 3
- endoplasmic reticulum 2
- vacuole 3
- plasma membrane 2
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G422100.1 | Wheat | extracellular | 93.67 | 95.83 |
| TraesCS6A01G383000.1 | Wheat | extracellular | 93.67 | 95.83 |
| TraesCS6D01G367800.1 | Wheat | extracellular | 92.31 | 94.44 |
| HORVU6Hr1G089510.1 | Barley | extracellular | 86.88 | 88.89 |
| Os01t0284500-01 | Rice | extracellular | 84.16 | 86.11 |
| HORVU6Hr1G089450.1 | Barley | extracellular | 78.73 | 80.56 |
| Zm00001d040519_P001 | Maize | extracellular | 75.57 | 76.61 |
| Zm00001d008210_P002 | Maize | extracellular | 73.76 | 76.17 |
| EES02802 | Sorghum | extracellular | 73.76 | 74.43 |
| HORVU3Hr1G107860.1 | Barley | extracellular | 66.52 | 65.33 |
| HORVU3Hr1G107830.1 | Barley | extracellular | 65.16 | 64.0 |
| HORVU3Hr1G107930.1 | Barley | extracellular | 63.35 | 62.22 |
| HORVU3Hr1G107870.1 | Barley | extracellular | 58.82 | 58.82 |
| HORVU3Hr1G107910.2 | Barley | mitochondrion, vacuole | 56.56 | 50.4 |
| HORVU4Hr1G005380.1 | Barley | extracellular | 49.32 | 48.66 |
| HORVU4Hr1G005540.1 | Barley | extracellular | 48.42 | 46.52 |
| HORVU3Hr1G034100.2 | Barley | cytosol, plastid | 55.2 | 46.21 |
| HORVU4Hr1G005440.3 | Barley | extracellular | 48.42 | 45.53 |
| HORVU7Hr1G036720.1 | Barley | extracellular | 39.37 | 41.04 |
| HORVU1Hr1G017170.1 | Barley | extracellular, plastid, vacuole | 61.54 | 40.6 |
| HORVU6Hr1G005420.1 | Barley | extracellular | 38.91 | 37.72 |
| HORVU2Hr1G127670.1 | Barley | extracellular, vacuole | 37.56 | 37.39 |
| HORVU0Hr1G023590.1 | Barley | extracellular, vacuole | 37.1 | 37.1 |
| HORVU6Hr1G066380.1 | Barley | extracellular, vacuole | 37.1 | 36.61 |
| HORVU3Hr1G066330.1 | Barley | extracellular, mitochondrion, vacuole | 42.99 | 35.98 |
| HORVU2Hr1G127660.1 | Barley | cytosol | 34.39 | 35.51 |
| HORVU5Hr1G109190.1 | Barley | extracellular, mitochondrion, vacuole | 46.15 | 35.05 |
| HORVU4Hr1G076480.3 | Barley | vacuole | 33.03 | 31.06 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | UniProt:A0A287V4F1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | InterPro:Germin |
| InterPro:Germin_Mn-BS | EnsemblPlantsGene:HORVU6Hr1G089570 | EnsemblPlants:HORVU6Hr1G089570.3 | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 |
| ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF36 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 |
| SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI000B480910 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr6H:-:570083302..570084074
Molecular Weight (calculated)
23138.9 Da
IEP (calculated)
8.090
GRAVY (calculated)
0.334
Length
221 amino acids
Sequence
(BLAST)
(BLAST)
001: FTMARLQLSV LAACAILLAL AAPSLAGDPD MLQDVCVADL ASLAAAIKIN GFPCKANITA DDFFFAGLKK AGNTNNPAGS VVTAANVQSF PGVNTLGVSM
101: ARIDYAVGGQ NPPHTHPRAT EIIFVTQGTL EVGFITTANK LFTRFVTVGE VFVFPRGLVH FQQNRGHGPA SVIAAFNSQL QGTQAIATTL LAASPPVPTD
201: VLAKAFRVDN EDIDAVKARF K
101: ARIDYAVGGQ NPPHTHPRAT EIIFVTQGTL EVGFITTANK LFTRFVTVGE VFVFPRGLVH FQQNRGHGPA SVIAAFNSQL QGTQAIATTL LAASPPVPTD
201: VLAKAFRVDN EDIDAVKARF K
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.