Factsheet for HORVU3Hr1G107930.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G489700.1	Wheat	extracellular	95.11	95.11
TraesCS3B01G543600.1	Wheat	extracellular	94.22	94.64
TraesCS3B01G543700.1	Wheat	extracellular	93.78	93.78
HORVU3Hr1G107860.1	Barley	extracellular	91.11	91.11
HORVU3Hr1G107830.1	Barley	extracellular	90.22	90.22
EES02060	Sorghum	extracellular	78.22	78.57
HORVU3Hr1G107870.1	Barley	extracellular	76.0	77.38
Zm00001d011853_P001	Maize	extracellular	75.56	75.22
EES04228	Sorghum	extracellular	73.78	73.78
Zm00001d042082_P001	Maize	extracellular	68.0	73.56
HORVU6Hr1G089510.1	Barley	extracellular	61.33	63.89
HORVU6Hr1G089570.3	Barley	extracellular, vacuole	62.22	63.35
HORVU6Hr1G089450.1	Barley	extracellular	58.67	61.11
HORVU3Hr1G107910.2	Barley	mitochondrion, vacuole	67.11	60.89
HORVU4Hr1G005380.1	Barley	extracellular	49.33	49.55
HORVU4Hr1G005540.1	Barley	extracellular	49.33	48.26
HORVU3Hr1G034100.2	Barley	cytosol, plastid	55.56	47.35
HORVU4Hr1G005440.3	Barley	extracellular	49.33	47.23
HORVU7Hr1G036720.1	Barley	extracellular	38.22	40.57
HORVU6Hr1G005420.1	Barley	extracellular	40.44	39.91
HORVU1Hr1G017170.1	Barley	extracellular, plastid, vacuole	57.33	38.51
HORVU0Hr1G023590.1	Barley	extracellular, vacuole	37.33	38.01
HORVU2Hr1G127670.1	Barley	extracellular, vacuole	37.33	37.84
HORVU6Hr1G066380.1	Barley	extracellular, vacuole	37.33	37.5
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	42.22	35.98
HORVU2Hr1G127660.1	Barley	cytosol	34.22	35.98
HORVU5Hr1G109190.1	Barley	extracellular, mitochondrion, vacuole	46.22	35.74
HORVU4Hr1G076480.3	Barley	vacuole	32.44	31.06

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS
EnsemblPlantsGene:HORVU3Hr1G107930	EnsemblPlants:HORVU3Hr1G107930.1	InterPro:IPR014710	UniProt:M0XE41	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI000296A467	SEG:seg	:

Description

No Description!

Coordinates

chrchr3H:-:673778875..673780084

Molecular Weight (calculated)

23520.5 Da

IEP (calculated)

7.451

GRAVY (calculated)

0.184

Length

225 amino acids

Sequence
(BLAST)

001: MAPKHLPAIL LAACATLLAL AVPLLAGDPD MLQDFCVADY KSLDGPLRLN GFPCKRPENV TADDFFSSAL ALPGNTGNPV GSAVTAANVE KLPGLNTLGV
101: SMSRVDYAPW GVNPPHTHPR ATEIIYVLEG SLDVGFITTA GKLFGRTVCK GEVFVFPRGL VHYQKNNGGP PAMAVSAFNS QLPGTQSLAV AMFGSSPPVP
201: TDVLARALQI DGGLVEAIKS KFPPK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.