Subcellular Localization
min:
: max
Winner_takes_all: vacuole
Predictor Summary:
Predictor Summary:
- extracellular 1
- endoplasmic reticulum 1
- vacuole 2
- plasma membrane 1
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS4A01G010200.1 | Wheat | cytosol, extracellular | 77.87 | 86.73 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 81.7 | 83.48 |
| TraesCS4B01G294100.1 | Wheat | extracellular | 79.15 | 83.41 |
| Os03t0179100-00 | Rice | extracellular, vacuole | 69.36 | 72.44 |
| Zm00001d027890_P001 | Maize | extracellular, vacuole | 64.68 | 66.09 |
| EER95401 | Sorghum | vacuole | 66.38 | 64.73 |
| VIT_01s0026g00970.t01 | Wine grape | extracellular | 51.06 | 54.3 |
| GSMUA_Achr1P21920_001 | Banana | endoplasmic reticulum, extracellular | 54.04 | 53.36 |
| PGSC0003DMT400058298 | Potato | extracellular, vacuole | 42.98 | 47.87 |
| Solyc05g006500.2.1 | Tomato | extracellular | 43.83 | 46.82 |
| KRH74710 | Soybean | extracellular | 42.98 | 45.91 |
| KRH69437 | Soybean | extracellular | 42.13 | 45.0 |
| AT1G10460.1 | Thale cress | extracellular, vacuole | 40.43 | 43.78 |
| Bra031713.1-P | Field mustard | vacuole | 31.06 | 38.42 |
| CDY34891 | Canola | vacuole | 31.06 | 38.42 |
| CDY07800 | Canola | vacuole | 29.36 | 36.13 |
| HORVU6Hr1G089510.1 | Barley | extracellular | 30.64 | 33.33 |
| HORVU6Hr1G089450.1 | Barley | extracellular | 30.64 | 33.33 |
| HORVU6Hr1G089570.3 | Barley | extracellular, vacuole | 31.06 | 33.03 |
| HORVU3Hr1G107930.1 | Barley | extracellular | 31.06 | 32.44 |
| HORVU3Hr1G107830.1 | Barley | extracellular | 30.64 | 32.0 |
| HORVU4Hr1G005380.1 | Barley | extracellular | 30.21 | 31.7 |
| HORVU3Hr1G107860.1 | Barley | extracellular | 30.21 | 31.56 |
| HORVU6Hr1G005420.1 | Barley | extracellular | 30.21 | 31.14 |
| HORVU3Hr1G107870.1 | Barley | extracellular | 28.94 | 30.77 |
| HORVU7Hr1G036720.1 | Barley | extracellular | 27.66 | 30.66 |
| HORVU4Hr1G005540.1 | Barley | extracellular | 29.79 | 30.43 |
| HORVU3Hr1G066330.1 | Barley | extracellular, mitochondrion, vacuole | 34.04 | 30.3 |
| HORVU4Hr1G005440.3 | Barley | extracellular | 29.79 | 29.79 |
| HORVU3Hr1G107910.2 | Barley | mitochondrion, vacuole | 29.79 | 28.23 |
| HORVU0Hr1G023590.1 | Barley | extracellular, vacuole | 26.38 | 28.05 |
| HORVU2Hr1G127660.1 | Barley | cytosol | 25.53 | 28.04 |
| HORVU2Hr1G127670.1 | Barley | extracellular, vacuole | 26.38 | 27.93 |
| HORVU6Hr1G066380.1 | Barley | extracellular, vacuole | 26.38 | 27.68 |
| HORVU3Hr1G034100.2 | Barley | cytosol, plastid | 28.94 | 25.76 |
| HORVU5Hr1G109190.1 | Barley | extracellular, mitochondrion, vacuole | 29.79 | 24.05 |
| HORVU1Hr1G017170.1 | Barley | extracellular, plastid, vacuole | 32.77 | 22.99 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | UniProt:A0A287PQI0 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 |
| GO:GO:0005575 | GO:GO:0005576 | GO:GO:0030145 | GO:GO:0045735 | GO:GO:0046872 | InterPro:Germin |
| InterPro:Germin_Mn-BS | EnsemblPlantsGene:HORVU4Hr1G076480 | EnsemblPlants:HORVU4Hr1G076480.3 | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 |
| ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF5 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 |
| SUPFAM:SSF51182 | SignalP:SignalP-noTM | UniParc:UPI000B461481 | SEG:seg | : | : |
Description
No Description!
Coordinates
chrchr4H:-:600669945..600670725
Molecular Weight (calculated)
23111.4 Da
IEP (calculated)
7.127
GRAVY (calculated)
0.153
Length
235 amino acids
Sequence
(BLAST)
(BLAST)
001: GVAMGATSNH AAPISRAILS LVTIIFSAVC DSDPDLLVDY CVADTRAAAG ALDFHFNGLP CIDPATARAG HFATSALSAP TDPSATLFGF NATVTSPAAS
101: LPGANXXXXX XXXXXXXXGG MAPLHSHPRA SEVALVLSGG VLVGFADTSY RLYTQRLRAG EAFVFPRGMV HFIRNEDTSS PAVVLSGLNS QSPGAQLLPF
201: SAFRTEPRLP DEVVKKTFRI TGQDVQRIQR SLGGS
101: LPGANXXXXX XXXXXXXXGG MAPLHSHPRA SEVALVLSGG VLVGFADTSY RLYTQRLRAG EAFVFPRGMV HFIRNEDTSS PAVVLSGLNS QSPGAQLLPF
201: SAFRTEPRLP DEVVKKTFRI TGQDVQRIQR SLGGS
001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
Arabidopsis Description
GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.