Subcellular Localization
min:
: max
Winner_takes_all: extracellular, vacuole
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 3
- golgi 3
- extracellular 4
- vacuole 3
- plasma membrane 2
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY34891 | Canola | vacuole | 65.9 | 75.26 |
| Bra031713.1-P | Field mustard | vacuole | 64.98 | 74.21 |
| CDY07800 | Canola | vacuole | 64.52 | 73.3 |
| KRH74710 | Soybean | extracellular | 58.53 | 57.73 |
| KRH69437 | Soybean | extracellular | 57.14 | 56.36 |
| VIT_01s0026g00970.t01 | Wine grape | extracellular | 56.22 | 55.2 |
| PGSC0003DMT400058298 | Potato | extracellular, vacuole | 52.07 | 53.55 |
| Solyc05g006500.2.1 | Tomato | extracellular | 53.0 | 52.27 |
| Os03t0179100-00 | Rice | extracellular, vacuole | 48.39 | 46.67 |
| EER95401 | Sorghum | vacuole | 51.61 | 46.47 |
| TraesCS4A01G010200.1 | Wheat | cytosol, extracellular | 45.16 | 46.45 |
| GSMUA_Achr1P21920_001 | Banana | endoplasmic reticulum, extracellular | 50.69 | 46.22 |
| Zm00001d027890_P001 | Maize | extracellular, vacuole | 47.47 | 44.78 |
| TraesCS4B01G294100.1 | Wheat | extracellular | 45.62 | 44.39 |
| TraesCS4D01G293000.1 | Wheat | endoplasmic reticulum, extracellular, vacuole | 45.16 | 42.61 |
| HORVU4Hr1G076480.3 | Barley | vacuole | 43.78 | 40.43 |
| AT1G72610.1 | Thale cress | extracellular, vacuole | 35.02 | 36.54 |
| AT1G09560.1 | Thale cress | extracellular | 36.41 | 36.07 |
| AT5G26700.1 | Thale cress | extracellular, vacuole | 34.1 | 34.74 |
| AT1G02335.1 | Thale cress | extracellular, vacuole | 35.02 | 34.7 |
| AT1G18970.1 | Thale cress | extracellular, vacuole | 35.02 | 34.55 |
| AT1G18980.1 | Thale cress | extracellular | 34.56 | 34.09 |
| AT3G62020.1 | Thale cress | extracellular, vacuole | 33.64 | 33.18 |
| AT3G05930.1 | Thale cress | extracellular | 32.72 | 32.42 |
| AT5G20630.1 | Thale cress | extracellular, plasma membrane, vacuole | 30.88 | 31.75 |
| AT1G74820.1 | Thale cress | extracellular | 28.11 | 26.87 |
| AT3G10080.2 | Thale cress | mitochondrion | 32.72 | 23.83 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | EntrezGene:837586 | UniProt:A0A178WAY9 | UniProt:A0JQ79 | ProteinID:AAD39567.1 |
| ProteinID:AAD46923.1 | ProteinID:AEE28582.1 | ArrayExpress:AT1G10460 | EnsemblPlantsGene:AT1G10460 | RefSeq:AT1G10460 | TAIR:AT1G10460 |
| RefSeq:AT1G10460-TAIR-G | EnsemblPlants:AT1G10460.1 | TAIR:AT1G10460.1 | EMBL:BT029449 | InterPro:Cupin_1 | Symbol:GLP7 |
| GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005575 | GO:GO:0005576 | GO:GO:0005618 | GO:GO:0005623 |
| GO:GO:0030145 | GO:GO:0030312 | GO:GO:0045735 | GO:GO:0046872 | GO:GO:0048046 | InterPro:Germin |
| InterPro:Germin_Mn-BS | InterPro:IPR014710 | RefSeq:NP_563870.2 | ProteinID:OAP15356.1 | UniProt:P92998 | PFAM:PF00190 |
| PO:PO:0000230 | PO:PO:0000293 | PO:PO:0007611 | PO:PO:0009005 | PO:PO:0009046 | PO:PO:0020100 |
| PRINTS:PR00325 | ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF5 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf |
| SMART:SM00835 | SUPFAM:SSF51182 | SignalP:SignalP-noTM | EMBL:U75202 | UniParc:UPI000004821A | SEG:seg |
Description
GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
Coordinates
chr1:-:3439030..3440359
Molecular Weight (calculated)
23196.1 Da
IEP (calculated)
7.559
GRAVY (calculated)
0.144
Length
217 amino acids
Sequence
(BLAST)
(BLAST)
001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.