Factsheet for Os03t0179100-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 7
plasma membrane 5
golgi 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	mitochondrion
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G010200.1	Wheat	cytosol, extracellular	77.33	82.46
TraesCS4B01G294100.1	Wheat	extracellular	75.11	75.78
Zm00001d027890_P001	Maize	extracellular, vacuole	76.89	75.22
TraesCS4D01G293000.1	Wheat	endoplasmic reticulum, extracellular, vacuole	76.89	75.22
EER95401	Sorghum	vacuole	78.67	73.44
HORVU4Hr1G076480.3	Barley	vacuole	72.44	69.36
VIT_01s0026g00970.t01	Wine grape	extracellular	58.22	59.28
GSMUA_Achr1P21920_001	Banana	endoplasmic reticulum, extracellular	62.22	58.82
PGSC0003DMT400058298	Potato	extracellular, vacuole	50.22	53.55
Solyc05g006500.2.1	Tomato	extracellular	50.67	51.82
KRH74710	Soybean	extracellular	48.44	49.55
KRH69437	Soybean	extracellular	47.56	48.64
AT1G10460.1	Thale cress	extracellular, vacuole	46.67	48.39
Bra031713.1-P	Field mustard	vacuole	35.56	42.11
CDY34891	Canola	vacuole	35.56	42.11
CDY07800	Canola	vacuole	34.22	40.31
Os05t0277500-01	Rice	extracellular	39.11	39.82
Os01t0284500-01	Rice	extracellular	38.22	39.81
Os01t0249200-01	Rice	extracellular	37.78	37.44
Os01t0952000-02	Rice	extracellular	36.44	36.77
Os01t0705100-00	Rice	extracellular	35.56	35.71
Os02t0532500-01	Rice	extracellular	36.0	35.37
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	35.56	35.24
Os03t0651800-00	Rice	extracellular	34.67	35.14
Os03t0804700-00	Rice	plastid	35.11	35.11
Os03t0694000-01	Rice	extracellular	34.22	33.62
Os03t0693800-00	Rice	extracellular	33.78	33.19
Os03t0693900-00	Rice	extracellular	33.33	33.04
Os01t0952100-00	Rice	extracellular	33.78	32.34
Os08t0460000-01	Rice	extracellular	29.78	31.46
Os03t0804500-01	Rice	extracellular	31.11	30.04
Os08t0459700-00	Rice	extracellular	27.11	27.85
Os04t0288100-00	Rice	mitochondrion	23.56	21.37

Protein Annotations

EntrezGene:107278121	Gene3D:2.60.120.10	MapMan:35.1	ProteinID:AAO13469.1	ProteinID:ABF94290.1	ProteinID:BAS82603.1
InterPro:Cupin_1	ProteinID:EAZ25801.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872
GO:GO:0048046	InterPro:Germin	InterPro:IPR014710	EnsemblPlantsGene:Os03g0179100	EnsemblPlants:Os03t0179100-00	PFAM:PF00190
PRINTS:PR00325	PANTHER:PTHR31238	PANTHER:PTHR31238:SF5	UniProt:Q8H021	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI00000ADC57	RefSeq:XP_015633295.1	RefSeq:XP_015633297.1
RefSeq:XP_015633298.1	RefSeq:XP_015633299.1	SEG:seg	:	:	:

Description

GERMIN-LIKE PROTEIN 3-1Similar to predicted protein. (Os03t0179100-00)

Coordinates

chr3:+:4157591..4158512

Molecular Weight (calculated)

23587.5 Da

IEP (calculated)

8.343

GRAVY (calculated)

0.316

Length

225 amino acids

Sequence
(BLAST)

001: MRAAVAHRIL LSLALFAVLC RCDPDLLFDY CVADTAAATA AGAFHLNGLA CIDPALARAD HFATSALSRA TNPAATLYGF NATLTSPAAS LPGANAQGLA
101: MARIDLAPGG MAPPHSHPRA SEAALVLSGS VLVGFADTSY RLYTQLLRAG EAFVFPRAMV HFLYNMDTAA PAVVLSGLNS QSPGAQLVPF SAFRTEPRLP
201: DEVLKKAFKI TGQDVQRIQK HLGGL

Best Arabidopsis Sequence Match ( AT1G10460.1 )
(BLAST)

001: MILNILLTLT LLMGRVKSDP DPLQDYCVSP PPSSHQQIFL NGKLCKDPTQ ASVSDFSTSA LSRPGNTKTK PFMINVTVTT TANLPGLNTV GLTMARLDFG
101: GSGVVPPHVH PRASEVTVCL DGVLLVGFVD TSGRVFTQEL HPGETFVFPK GLIHFLYNID TVSSALAVSG LSSQNPGTQI VSLSSFISKP PFLVEVLKSA
201: YDINGQDVAR IRKSLEG

Arabidopsis Description

GLP7Germin-like protein subfamily 1 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92998]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.