Factsheet for Os01t0705100-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	mitochondrion
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G109200.1	Wheat	extracellular	77.68	78.73
TraesCS3D01G254200.1	Wheat	extracellular	77.23	77.93
TraesCS3A01G253300.1	Wheat	extracellular	77.23	77.93
TraesCS2D01G109300.1	Wheat	vacuole	77.23	77.58
TraesCS3B01G285200.1	Wheat	extracellular	76.79	77.48
EES01342	Sorghum	extracellular, vacuole	76.34	77.38
Zm00001d043710_P001	Maize	extracellular, vacuole	74.55	75.91
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	63.39	69.95
HORVU3Hr1G066330.1	Barley	extracellular, mitochondrion, vacuole	77.68	65.91
GSMUA_Achr4P17250_001	Banana	extracellular	40.62	50.28
Os01t0284500-01	Rice	extracellular	47.77	49.54
GSMUA_AchrUn_...	Banana	extracellular	33.93	47.5
Os01t0249200-01	Rice	extracellular	47.32	46.7
Os03t0804700-00	Rice	plastid	46.88	46.67
Os05t0277500-01	Rice	extracellular	45.09	45.7
Os03t0804500-01	Rice	extracellular	46.88	45.06
Os03t0694000-01	Rice	extracellular	45.09	44.1
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	44.64	44.05
Os01t0952100-00	Rice	extracellular	45.98	43.83
Os03t0693800-00	Rice	extracellular	44.64	43.67
Os01t0952000-02	Rice	extracellular	41.96	42.15
Os03t0651800-00	Rice	extracellular	41.07	41.44
Os03t0693900-00	Rice	extracellular	41.07	40.53
Os03t0179100-00	Rice	extracellular, vacuole	35.71	35.56
Os08t0460000-01	Rice	extracellular	33.48	35.21
Os08t0459700-00	Rice	extracellular	33.48	34.25
Os02t0532500-01	Rice	extracellular	34.38	33.62
Os04t0288100-00	Rice	mitochondrion	27.23	24.6

Protein Annotations

EntrezGene:107277647	Gene3D:2.60.120.10	MapMan:35.1	ProteinID:BAB44028.1	ProteinID:BAB86506.1	ProteinID:BAS73925.1
InterPro:Cupin_1	ProteinID:EAZ13253.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576
GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872
GO:GO:0048046	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	EnsemblPlantsGene:Os01g0705100	EnsemblPlants:Os01t0705100-00
PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF34	UniProt:Q94JF3
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix
UniParc:UPI00000A0B22	RefSeq:XP_015613392.1	SEG:seg	:	:	:

Description

GERMIN-LIKE PROTEIN 1-3Similar to Germin-like protein. (Os01t0705100-00)

Coordinates

chr1:+:29231900..29232574

Molecular Weight (calculated)

23277.2 Da

IEP (calculated)

6.774

GRAVY (calculated)

0.417

Length

224 amino acids

Sequence
(BLAST)

001: MASSRSVVLR VLVAVAVVAA AGAPRLAVAD SPPLQDICVA DLRAATAVDG FPCKPTASVV SDDFFCDAIV QAPSTSNPFG VNSTRATVSA FPGLNTLGLS
101: ITRTDLAPGG LNPPHSHPRA SELVLVLSGE VMVGFTTAAN RLFSKVVREK ELFVVPRGLQ HFQLNVGAGN ASFVAMFDSQ SPGLVTPTFA LFATQPAMPM
201: EVLAKTFLMG EDEVGAIKSK FAGF

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.