Factsheet for Os03t0651800-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 9
endoplasmic reticulum 5
vacuole 6
plasma membrane 5
golgi 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, secretory
BaCelLo:	secretory
EpiLoc:	vacuole
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
PTS1:	peroxisome
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os01t0952000-02	Rice	extracellular	90.09	89.69
Os01t0284500-01	Rice	extracellular	67.12	68.98
Os01t0952100-00	Rice	extracellular	65.32	61.7
Os05t0277500-01	Rice	extracellular	60.81	61.09
Os01t0249200-01	Rice	extracellular	60.81	59.47
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	46.4	45.37
Os03t0694000-01	Rice	extracellular	44.14	42.79
Os03t0693900-00	Rice	extracellular	43.24	42.29
Os03t0804700-00	Rice	plastid	42.79	42.22
Os03t0693800-00	Rice	extracellular	43.24	41.92
Os03t0804500-01	Rice	extracellular	43.24	41.2
Os01t0705100-00	Rice	extracellular	41.44	41.07
Os08t0460000-01	Rice	extracellular	39.19	40.85
Os02t0532500-01	Rice	extracellular	39.19	37.99
Os03t0179100-00	Rice	extracellular, vacuole	35.14	34.67
Os08t0459700-00	Rice	extracellular	31.98	32.42
Os04t0288100-00	Rice	mitochondrion	29.28	26.21

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:4333595	ProteinID:AAP68412.1	ProteinID:AAX95539.1	ProteinID:ABF97927.1
ProteinID:BAF12707.1	ProteinID:BAS85523.1	InterPro:Cupin_1	ProteinID:EAZ27969.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0006810	GO:GO:0007275
GO:GO:0008150	GO:GO:0009506	GO:GO:0009987	GO:GO:0010497	GO:GO:0030145	GO:GO:0030312
GO:GO:0045735	GO:GO:0046872	GO:GO:0048046	GO:GO:2000280	InterPro:Germin	InterPro:Germin_Mn-BS
InterPro:IPR014710	EnsemblPlantsGene:Os03g0651800	EnsemblPlants:Os03t0651800-00	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	UniProt:Q7XZY1	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI00001A9702	RefSeq:XP_015630224.1	SEG:seg	:

Description

GERMIN-LIKE PROTEIN 3-2Similar to Germin-like protein subfamily 2 member 1 precursor. (Os03t0651800-00)

Coordinates

chr3:+:25315697..25317065

Molecular Weight (calculated)

23553.4 Da

IEP (calculated)

8.228

GRAVY (calculated)

0.179

Length

222 amino acids

Sequence
(BLAST)

001: MAKLILATFA VVFLALAATS LAGDPDMLQD VCVADYKSLR GPLRLNGIPC KRLENVTAND FFFDGLTNAG NTTNAVGSLV TAASVERLPG LNTMGVSMAR
101: IDYAPWGLSP PHTHPRATEI MFVAEGTLDV GFVTTANKLF TRTVSKGEVF VFPRGLVHFQ RNSGNTSALA IAAFNSQLPG TQSIADTLFG AAPPLPSDTL
201: ARAFQVDGGM VESIKSKFPP KY

Best Arabidopsis Sequence Match ( AT1G09560.1 )
(BLAST)

001: MASPTLTLLL LLTTVSFFIS SSADPDMLQD LCVADLPSGI KINGFPCKDA ATVTSADFFS QGLAKPGLTN NTFGALVTGA NVMTIPGLNT LGVSLSRIDY
101: APGGLNPPHT HPRATEVVFV LEGTLDVGFL TTANKLISQS LKKGDVFAFP KGLVHFQKNN GDVPASVIAA FNSQLPGTQS LGATLFGSTP PVPDNILAQA
201: FQTSPGTVKH IKSKFQPKK

Arabidopsis Description

GLP4Germin-like protein subfamily 2 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94014]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.