Factsheet for Os08t0459700-00

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 5
golgi 5
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
EpiLoc:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

extracellular: 25047395

msms PMID: 25047395 doi

JY Kim, J Wu, SJ Kwon, H Oh, SE Lee, SG Kim, Y Wang, GK Agrawal, R Rakwal, KY Kang, IP Ahn, BG Kim, ST Kim

Department of Plant Bioscience, Life and Industry Convergence Research Institute, Pusan National University, Miryang, South Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032047_P001	Maize	cytosol	54.79	62.18
EES15103	Sorghum	extracellular	58.45	58.18
Os08t0460000-01	Rice	extracellular	53.88	55.4
Zm00001d032048_P001	Maize	cytosol	29.68	50.39
KRH47606	Soybean	extracellular, vacuole	45.66	48.08
KRH47601	Soybean	endoplasmic reticulum	45.66	48.08
KRH47602	Soybean	extracellular, vacuole	45.66	48.08
KRH06188	Soybean	extracellular	36.07	43.65
KRH47603	Soybean	extracellular, vacuole	44.75	43.56
KRH06189	Soybean	endoplasmic reticulum, extracellular, vacuole	37.44	39.81
KRH07140	Soybean	extracellular, vacuole	37.9	39.52
Os04t0288100-00	Rice	mitochondrion	43.84	38.71
KRH47605	Soybean	extracellular	18.26	37.38
Os05t0277500-01	Rice	extracellular	36.53	36.2
KRH07144	Soybean	extracellular, vacuole	35.16	36.15
KRH07141	Soybean	cytosol	33.33	36.14
Os01t0284500-01	Rice	extracellular	35.16	35.65
Os03t0804500-01	Rice	extracellular	37.9	35.62
Os03t0804700-00	Rice	plastid	35.16	34.22
Os01t0249200-01	Rice	extracellular	35.16	33.92
Os01t0705100-00	Rice	extracellular	34.25	33.48
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	34.25	33.04
Os01t0952100-00	Rice	extracellular	35.16	32.77
Os03t0694000-01	Rice	extracellular	33.79	32.31
Os01t0952000-02	Rice	extracellular	32.88	32.29
Os03t0651800-00	Rice	extracellular	32.42	31.98
Os03t0693800-00	Rice	extracellular	33.33	31.88
Os03t0693900-00	Rice	extracellular	32.42	31.28
Os02t0532500-01	Rice	extracellular	30.59	29.26
Os03t0179100-00	Rice	extracellular, vacuole	27.85	27.11

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	EntrezGene:9271637	ProteinID:BAD09600.1	ProteinID:BAD09955.1	ProteinID:BAH94337.1
ProteinID:BAT05756.1	InterPro:Cupin_1	ProteinID:EAZ42985.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005575
GO:GO:0005576	GO:GO:0005618	GO:GO:0005623	GO:GO:0030145	GO:GO:0030312	GO:GO:0045735
GO:GO:0046872	GO:GO:0048046	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	EnsemblPlantsGene:Os08g0459700
EnsemblPlants:Os08t0459700-00	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF49
UniProt:Q6Z964	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	SignalP:SignalP-noTM
UniParc:UPI000023AE97	RefSeq:XP_015649499.1	SEG:seg	:	:	:

Description

GERMIN-LIKE PROTEIN 8-13Similar to Adenosine diphosphate glucose pyrophosphatase precursor. (Os08t0459700-00)

Coordinates

chr8:-:22553089..22554026

Molecular Weight (calculated)

22925.5 Da

IEP (calculated)

7.494

GRAVY (calculated)

0.327

Length

219 amino acids

Sequence
(BLAST)

001: MSSTPLLPVL LSTMILLSAV STTTTALTQD FCVANLPLGA DTPSGYQCRP AATVTAADFY SGALARPGIL IRPFNTSLAS AFVQQYPAVN GLGISASRVD
101: ILPGGVVPLH THPAGSELLY VLDGALVAGF ISSSDNKVYY KEVSKGGMFV FPQGLLHFQY NTGDTTAVAF AAYSSSNPGL QILDYALFAN NLPTSYVVKG
201: TFLAEAEVRR LKSKFGGSG

Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)

001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG

Arabidopsis Description

GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.