Factsheet for Zm00001d032048_P001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d032047_P001	Maize	cytosol	83.72	55.96
EES15103	Sorghum	extracellular	62.02	36.36
Os08t0459700-00	Rice	extracellular	50.39	29.68
KRH06188	Soybean	extracellular	39.53	28.18
KRH47602	Soybean	extracellular, vacuole	41.86	25.96
KRH47606	Soybean	extracellular, vacuole	41.86	25.96
Zm00001d037513_P001	Maize	plastid	42.64	25.94
KRH47601	Soybean	endoplasmic reticulum	39.53	24.52
KRH47603	Soybean	extracellular, vacuole	41.09	23.56
KRH07141	Soybean	cytosol	34.11	21.78
KRH07140	Soybean	extracellular, vacuole	34.88	21.43
KRH06189	Soybean	endoplasmic reticulum, extracellular, vacuole	34.11	21.36
KRH07144	Soybean	extracellular, vacuole	34.11	20.66
Zm00001d040519_P001	Maize	extracellular	34.88	20.64
Zm00001d008210_P002	Maize	extracellular	34.11	20.56
Zm00001d018954_P002	Maize	extracellular	33.33	18.61
Zm00001d043710_P001	Maize	extracellular, vacuole	29.46	17.27
Zm00001d011853_P001	Maize	extracellular	30.23	17.26
Zm00001d038137_P001	Maize	extracellular	29.46	16.74
Zm00001d033583_P001	Maize	extracellular	27.13	15.56
Zm00001d016697_P001	Maize	extracellular	27.91	15.38
Zm00001d034514_P001	Maize	extracellular	27.13	15.35
Zm00001d027890_P001	Maize	extracellular, vacuole	27.13	15.22
Zm00001d042082_P001	Maize	extracellular	23.26	14.42
KRH47605	Soybean	extracellular	1.55	1.87

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A1D6KN98	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005575	GO:GO:0005576	GO:GO:0030145	GO:GO:0045735	GO:GO:0046872	InterPro:Germin
InterPro:IPR014710	ProteinID:ONM04293.1	PFAM:PF00190	PRINTS:PR00325	PANTHER:PTHR31238	PANTHER:PTHR31238:SF49
InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182	TMHMM:TMhelix	UniParc:UPI000844F7C2
EnsemblPlantsGene:Zm00001d032048	EnsemblPlants:Zm00001d032048_P001	EnsemblPlants:Zm00001d032048_T001	SEG:seg	:	:

Description

Germin-like protein subfamily 3 member 1

Coordinates

chr1:+:210738991..210741417

Molecular Weight (calculated)

14050.8 Da

IEP (calculated)

6.240

GRAVY (calculated)

0.103

Length

129 amino acids

Sequence
(BLAST)

001: MHTHPEASEV MFVLEGTFSA GFISAETNKA YVKSLKKGDL YVFPQGLLHF QFNTGNTTAT AIAAYSNQNP GLQIAVYALF GNTLTVETIA VYALFGNTLT
101: VETVNKTTFV TKEEVMRLKD LFGQSSVPS

Best Arabidopsis Sequence Match ( AT5G20630.1 )
(BLAST)

001: MKMIIQIFFI ISLISTISFA SVQDFCVADP KGPQSPSGYS CKNPDQVTEN DFAFTGLGTA GNTSNIIKAA VTPAFAPAYA GINGLGVSLA RLDLAGGGVI
101: PLHTHPGASE VLVVIQGTIC AGFISSANKV YLKTLNRGDS MVFPQGLLHF QLNSGKGPAL AFVAFGSSSP GLQILPFALF ANDLPSELVE ATTFLSDAEV
201: KKLKGVLGGT N

Arabidopsis Description

GER3Germin-like protein subfamily 3 member 3 [Source:UniProtKB/Swiss-Prot;Acc:P94072]
SUBAcon: [plasma membrane,extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.