Factsheet for Zm00001d042082_P001

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d011853_P001	Maize	extracellular	87.02	80.09
EES02060	Sorghum	extracellular	86.06	79.91
EES04228	Sorghum	extracellular	82.21	76.0
TraesCS3D01G490500.1	Wheat	extracellular	75.48	69.78
TraesCS3B01G544200.1	Wheat	extracellular	74.52	68.89
TraesCS3B01G543700.1	Wheat	extracellular	74.52	68.89
TraesCS3B01G543800.1	Wheat	extracellular	74.52	68.89
TraesCS7D01G477200.1	Wheat	extracellular	74.04	68.44
TraesCSU01G057500.1	Wheat	extracellular	74.04	68.44
TraesCS3D01G489700.1	Wheat	extracellular	74.04	68.44
HORVU3Hr1G107860.1	Barley	extracellular	74.04	68.44
HORVU3Hr1G107830.1	Barley	extracellular	74.04	68.44
TraesCS3B01G543600.1	Wheat	extracellular	73.56	68.3
TraesCS3A01G040900.1	Wheat	extracellular	73.56	68.0
HORVU3Hr1G107930.1	Barley	extracellular	73.56	68.0
TraesCS3D01G489800.1	Wheat	extracellular	73.08	67.56
HORVU3Hr1G107870.1	Barley	extracellular	63.46	59.73
TraesCS3D01G490400.1	Wheat	extracellular	61.06	58.8
Zm00001d038137_P001	Maize	extracellular	63.94	58.59
Zm00001d008210_P002	Maize	extracellular	60.1	58.41
TraesCSU01G057600.1	Wheat	extracellular	59.13	57.48
Zm00001d040519_P001	Maize	extracellular	56.73	54.13
Zm00001d018954_P002	Maize	extracellular	57.69	51.95
Zm00001d033583_P001	Maize	extracellular	44.23	40.89
Zm00001d043710_P001	Maize	extracellular, vacuole	42.31	40.0
Zm00001d034514_P001	Maize	extracellular	43.27	39.47
Zm00001d037513_P001	Maize	plastid	35.58	34.91
Zm00001d027890_P001	Maize	extracellular, vacuole	37.98	34.35
Zm00001d032047_P001	Maize	cytosol	31.25	33.68
Zm00001d016697_P001	Maize	extracellular	37.5	33.33
Zm00001d032048_P001	Maize	cytosol	14.42	23.26

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	UniProt:A0A1D6N137	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488
GO:GO:0030145	GO:GO:0045735	InterPro:Germin_Mn-BS	InterPro:IPR014710	ProteinID:ONM34475.1	PFAM:PF00190
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	UniParc:UPI000843E9E9	EnsemblPlantsGene:Zm00001d042082	EnsemblPlants:Zm00001d042082_P001	EnsemblPlants:Zm00001d042082_T001
SEG:seg	:	:	:	:	:

Description

Germin-like protein subfamily 2 member 1

Coordinates

chr3:-:150113590..150114479

Molecular Weight (calculated)

21343.4 Da

IEP (calculated)

5.711

GRAVY (calculated)

0.134

Length

208 amino acids

Sequence
(BLAST)

001: MANKLATTSL LAAVLLALAA PSLAGDPDML QDICVADYKS LQGPLRLNGF PCKRPENVTA DDFFSNALAS PGSTCNALGS AVTPADVRTL PGLNTLGVSV
101: SRIDYAPWGV NPPHVHPRAT EVIFVLQGSL DVGFVAATAT GGSRRPPRNS GGSPAAVLSA FDSQLPGTQP VAEALFGASP PVPTDVLARS FQVDGGLVEA
201: IRSNFPPK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.