Factsheet for TraesCS3B01G543800.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 4
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G489800.1	Wheat	extracellular	97.33	97.33
TraesCS3B01G543700.1	Wheat	extracellular	96.0	96.0
TraesCS3B01G544200.1	Wheat	extracellular	95.11	95.11
TraesCS3B01G543600.1	Wheat	extracellular	94.22	94.64
HORVU3Hr1G107830.1	Barley	extracellular	94.22	94.22
HORVU3Hr1G107860.1	Barley	extracellular	94.22	94.22
EES02060	Sorghum	extracellular	80.0	80.36
EES04228	Sorghum	extracellular	75.56	75.56
Zm00001d011853_P001	Maize	extracellular	75.11	74.78
Zm00001d042082_P001	Maize	extracellular	68.89	74.52
TraesCS3B01G544000.1	Wheat	extracellular	69.33	68.12
TraesCS3B01G200200.1	Wheat	extracellular	64.44	65.91
TraesCS6B01G422100.1	Wheat	extracellular	62.67	65.28
TraesCS6B01G422000.1	Wheat	extracellular	61.78	64.35
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	52.89	63.3
TraesCS6B01G420700.1	Wheat	extracellular	60.44	62.96
TraesCS6B01G421200.1	Wheat	extracellular	60.0	62.5
TraesCS6B01G420800.1	Wheat	extracellular	59.56	62.04
TraesCS1B01G098000.1	Wheat	extracellular	58.67	58.41
TraesCS4B01G033500.1	Wheat	cytosol	28.0	49.22
TraesCS3B01G282500.1	Wheat	extracellular	48.44	48.66
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	48.44	48.66
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	48.44	48.66
TraesCS4B01G033300.1	Wheat	extracellular	48.0	48.21
TraesCS4B01G033600.1	Wheat	extracellular, unclear	47.11	47.32
TraesCS4B01G033400.1	Wheat	extracellular	47.56	46.12
TraesCS3B01G282300.1	Wheat	extracellular	41.33	45.37
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	44.89	45.09
TraesCS3B01G285200.1	Wheat	extracellular	44.44	45.05
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	44.44	43.48
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	36.89	40.89
TraesCS2B01G090300.1	Wheat	extracellular	37.78	40.09
TraesCS7B01G084000.1	Wheat	plastid	37.33	39.62
TraesCS6B01G041100.1	Wheat	extracellular	40.0	39.47
TraesCS2B01G616500.1	Wheat	extracellular	37.78	39.17
TraesCS4B01G294100.1	Wheat	extracellular	34.67	34.98

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF28	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G543800	EnsemblPlants:TraesCS3B01G543800.1	SEG:seg

Description

No Description!

Coordinates

chr3B:+:781356289..781357063

Molecular Weight (calculated)

23396.4 Da

IEP (calculated)

7.950

GRAVY (calculated)

0.228

Length

225 amino acids

Sequence
(BLAST)

001: MAPKQLPAVL LAACATLLAL AAPLLAGDPD MLQDFCVADY KSLNGPLRLN GFPCKRPENV TADDFFSSAL ALPGNTGNPV GSAVTAANVE KLPGLNTMGV
101: SMSRVDYAAW GVNPPHTHPR ATEIIYVLEG SLDVGFVTTA GKLFARTVCK GELFVFPRGL VHYQKNNGGA PAAAISAFNS QLPGTQSLAL ALFAASPPVP
201: TDVLARALQI DGGLVEAIKS KFPPK

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.