Factsheet for TraesCS6B01G422000.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6D01G367700.1	Wheat	extracellular	97.22	97.22
TraesCS6A01G382900.1	Wheat	extracellular	97.22	97.22
TraesCS6B01G422100.1	Wheat	extracellular	95.37	95.37
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	76.39	87.77
Os01t0284500-01	Rice	extracellular	86.11	86.11
TraesCS6B01G420700.1	Wheat	extracellular	85.19	85.19
TraesCS6B01G421200.1	Wheat	extracellular	84.72	84.72
TraesCS6B01G420800.1	Wheat	extracellular	84.72	84.72
Zm00001d008210_P002	Maize	extracellular	76.39	77.1
Zm00001d040519_P001	Maize	extracellular	77.78	77.06
EES02802	Sorghum	extracellular	76.85	75.8
TraesCS3B01G200200.1	Wheat	extracellular	63.89	62.73
TraesCS3B01G543800.1	Wheat	extracellular	64.35	61.78
TraesCS3B01G544200.1	Wheat	extracellular	63.89	61.33
TraesCS3B01G543600.1	Wheat	extracellular	63.43	61.16
TraesCS1B01G098000.1	Wheat	extracellular	63.89	61.06
TraesCS3B01G543700.1	Wheat	extracellular	62.96	60.44
TraesCS3B01G544000.1	Wheat	extracellular	59.72	56.33
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	49.54	47.77
TraesCS4B01G033500.1	Wheat	cytosol	28.24	47.66
TraesCS4B01G033300.1	Wheat	extracellular	48.61	46.88
TraesCS4B01G033600.1	Wheat	extracellular, unclear	48.61	46.88
TraesCS3B01G282500.1	Wheat	extracellular	48.61	46.88
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	48.15	46.43
TraesCS4B01G033400.1	Wheat	extracellular	49.07	45.69
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	46.76	45.09
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	46.76	43.91
TraesCS3B01G282300.1	Wheat	extracellular	41.67	43.9
TraesCS3B01G285200.1	Wheat	extracellular	43.98	42.79
TraesCS2B01G090300.1	Wheat	extracellular	41.67	42.45
TraesCS7B01G084000.1	Wheat	plastid	40.74	41.51
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	38.43	40.89
TraesCS2B01G616500.1	Wheat	extracellular	40.74	40.55
TraesCS6B01G041100.1	Wheat	extracellular	41.67	39.47
TraesCS4B01G294100.1	Wheat	extracellular	35.19	34.08

Protein Annotations

EnsemblPlants:TraesCS6B01G422000.1	EnsemblPlantsGene:TraesCS6B01G422000	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SEG:seg	SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:

Description

No Description!

Coordinates

chr6B:+:692570660..692571543

Molecular Weight (calculated)

22612.2 Da

IEP (calculated)

6.241

GRAVY (calculated)

0.294

Length

216 amino acids

Sequence
(BLAST)

001: MARLQLSVVA ACTVLLALAA PSLAGDPDML QDVCVADLAS PIKINGFPCK ANITADDFFF AGLKKAGNTN NPAGSVVTAA NVQSFPGVNT LGVSMARIDY
101: AVGGQNPPHT HPRATEIIFV TEGTLEVGFI TTANKLFTKV VTVGEVFVFP RGLVHFQQNR GDCPASVIAA FNSQLQGTQA IATTLLAATP PVPTDVLAKA
201: FRVDNEDIDA VKARFN

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.