Factsheet for TraesCS4B01G033500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
extracellular 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, extracellular, mitochondrion
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G181600.1	Wheat	mitochondrion	92.97	67.61
TraesCS4B01G033300.1	Wheat	extracellular	97.66	55.8
HORVU4Hr1G005380.1	Barley	extracellular	96.88	55.36
TraesCS4B01G033600.1	Wheat	extracellular, unclear	96.88	55.36
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	94.53	54.02
TraesCS4B01G033400.1	Wheat	extracellular	96.88	53.45
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	92.19	52.68
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	92.19	52.68
TraesCS3B01G282500.1	Wheat	extracellular	92.19	52.68
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	84.38	47.58
Os03t0694000-01	Rice	extracellular	84.38	47.16
Os03t0693800-00	Rice	extracellular	83.59	46.72
EER91050	Sorghum	extracellular	81.25	46.22
Os03t0693900-00	Rice	extracellular	79.69	44.93
Zm00001d033583_P001	Maize	extracellular	78.12	44.44
TraesCS3B01G282300.1	Wheat	extracellular	71.09	44.39
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	46.09	31.38
GSMUA_AchrUn_...	Banana	extracellular	38.28	30.62
GSMUA_Achr4P17250_001	Banana	extracellular	40.62	28.73
TraesCS6B01G422100.1	Wheat	extracellular	48.44	28.7
TraesCS6B01G422000.1	Wheat	extracellular	47.66	28.24
TraesCS6B01G421200.1	Wheat	extracellular	47.66	28.24
TraesCS3B01G543600.1	Wheat	extracellular	49.22	28.12
TraesCS3B01G543800.1	Wheat	extracellular	49.22	28.0
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	50.0	27.83
TraesCS6B01G420800.1	Wheat	extracellular	46.88	27.78
TraesCS3B01G543700.1	Wheat	extracellular	48.44	27.56
TraesCS1B01G098000.1	Wheat	extracellular	48.44	27.43
TraesCS6B01G420700.1	Wheat	extracellular	46.09	27.31
TraesCS3B01G544200.1	Wheat	extracellular	47.66	27.11
TraesCS3B01G200200.1	Wheat	extracellular	43.75	25.45
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	39.84	25.12
TraesCS3B01G544000.1	Wheat	extracellular	43.75	24.45
TraesCS3B01G285200.1	Wheat	extracellular	42.19	24.32
TraesCS2B01G616500.1	Wheat	extracellular	36.72	21.66
TraesCS6B01G041100.1	Wheat	extracellular	38.28	21.49
TraesCS7B01G084000.1	Wheat	plastid	34.38	20.75
TraesCS4B01G294100.1	Wheat	extracellular	35.94	20.63
TraesCS2B01G090300.1	Wheat	extracellular	33.59	20.28

Protein Annotations

EnsemblPlants:TraesCS4B01G033500.1	EnsemblPlantsGene:TraesCS4B01G033500	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF26	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr4B:+:24746070..24746456

Molecular Weight (calculated)

13670.9 Da

IEP (calculated)

10.279

GRAVY (calculated)

0.326

Length

128 amino acids

Sequence
(BLAST)

001: MNRVDFALGG TNPPHIHPRA TEIGIVMKGE LLVGILGSLD SGNKLYSRVV HAGETFLIPR GLMHFQFNVG KTEASMVVSF NSQNPGIVFV ALTLFGSNPP
101: IPTPVLTKAL RVEAGVVELL KSKFAAGF

Best Arabidopsis Sequence Match ( AT1G18970.1 )
(BLAST)

001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV

Arabidopsis Description

GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.