Factsheet for TraesCS6B01G420700.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	84.26	96.81
TraesCS6D01G367000.1	Wheat	extracellular, plasma membrane, vacuole	94.44	94.44
TraesCS6A01G382200.1	Wheat	extracellular	93.06	93.06
HORVU6Hr1G089510.1	Barley	extracellular	91.2	91.2
TraesCSU01G088800.1	Wheat	cytosol	51.39	90.98
Os01t0284500-01	Rice	extracellular	86.57	86.57
TraesCS6B01G422100.1	Wheat	extracellular	86.57	86.57
TraesCS6B01G422000.1	Wheat	extracellular	85.19	85.19
TraesCS6B01G421200.1	Wheat	extracellular	83.33	83.33
TraesCS6B01G420800.1	Wheat	extracellular	82.87	82.87
Zm00001d008210_P002	Maize	extracellular	76.39	77.1
Zm00001d040519_P001	Maize	extracellular	77.31	76.61
EES02802	Sorghum	extracellular	76.85	75.8
TraesCS3B01G200200.1	Wheat	extracellular	67.13	65.91
TraesCS1B01G098000.1	Wheat	extracellular	65.28	62.39
TraesCS3B01G543800.1	Wheat	extracellular	62.96	60.44
TraesCS3B01G544200.1	Wheat	extracellular	62.96	60.44
TraesCS3B01G543600.1	Wheat	extracellular	62.5	60.27
TraesCS3B01G543700.1	Wheat	extracellular	62.5	60.0
TraesCS3B01G544000.1	Wheat	extracellular	56.02	52.84
TraesCS4B01G033500.1	Wheat	cytosol	27.31	46.09
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	47.69	45.98
TraesCS4B01G033600.1	Wheat	extracellular, unclear	47.22	45.54
TraesCS4B01G033300.1	Wheat	extracellular	47.22	45.54
TraesCS3B01G282500.1	Wheat	extracellular	46.76	45.09
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	46.3	44.64
TraesCS4B01G033400.1	Wheat	extracellular	47.22	43.97
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	45.37	43.75
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	40.74	43.35
TraesCS3B01G285200.1	Wheat	extracellular	44.44	43.24
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	44.91	42.17
TraesCS3B01G282300.1	Wheat	extracellular	39.35	41.46
TraesCS2B01G090300.1	Wheat	extracellular	39.81	40.57
TraesCS7B01G084000.1	Wheat	plastid	39.35	40.09
TraesCS2B01G616500.1	Wheat	extracellular	39.81	39.63
TraesCS6B01G041100.1	Wheat	extracellular	39.35	37.28
TraesCS4B01G294100.1	Wheat	extracellular	36.57	35.43

Protein Annotations

Gene3D:2.60.120.10	MapMan:35.1	InterPro:Cupin_1	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	PFAM:PF00190	PRINTS:PR00325
ScanProsite:PS00725	PANTHER:PTHR31238	PANTHER:PTHR31238:SF36	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835
SUPFAM:SSF51182	SignalP:SignalP-noTM	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS6B01G420700	EnsemblPlants:TraesCS6B01G420700.1	SEG:seg

Description

No Description!

Coordinates

chr6B:+:691944917..691945665

Molecular Weight (calculated)

22658.2 Da

IEP (calculated)

7.580

GRAVY (calculated)

0.257

Length

216 amino acids

Sequence
(BLAST)

001: MARIQLSAIA AFAVFLALAA PSIAGDPDML QDVCVADLKS SIKLNGFPCK AEITADDFFF AGLKKPGNTN NPAGSNVTAA NVQSFSGVNT LGVSMARIDY
101: APGGQNPPHT HPRATEIIFV LDGVLEVGFI TTANKLFTKT ITVGDVFVFP RGLVHFQQNR GHVPASVIAG FNSQLQGTQA IATTLFAAAP PVPSDVLAKA
201: FRVGTEEIDA VKAKFQ

Best Arabidopsis Sequence Match ( AT1G02335.1 )
(BLAST)

001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK

Arabidopsis Description

GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.