Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- extracellular 6
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 4
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCSU01G057500.1 | Wheat | extracellular | 96.44 | 96.44 |
| TraesCS3D01G490500.1 | Wheat | extracellular | 95.56 | 95.56 |
| TraesCS3B01G543700.1 | Wheat | extracellular | 95.56 | 95.56 |
| TraesCS3B01G543800.1 | Wheat | extracellular | 95.11 | 95.11 |
| HORVU3Hr1G107830.1 | Barley | extracellular | 93.78 | 93.78 |
| HORVU3Hr1G107860.1 | Barley | extracellular | 93.78 | 93.78 |
| TraesCS3B01G543600.1 | Wheat | extracellular | 93.33 | 93.75 |
| EES02060 | Sorghum | extracellular | 78.67 | 79.02 |
| Zm00001d042082_P001 | Maize | extracellular | 68.89 | 74.52 |
| Zm00001d011853_P001 | Maize | extracellular | 74.67 | 74.34 |
| EES04228 | Sorghum | extracellular | 74.22 | 74.22 |
| TraesCS3B01G544000.1 | Wheat | extracellular | 68.44 | 67.25 |
| TraesCS3B01G200200.1 | Wheat | extracellular | 65.33 | 66.82 |
| TraesCS6B01G421300.1 | Wheat | cytosol, extracellular, plastid | 54.22 | 64.89 |
| TraesCS6B01G422100.1 | Wheat | extracellular | 62.22 | 64.81 |
| TraesCS6B01G422000.1 | Wheat | extracellular | 61.33 | 63.89 |
| TraesCS6B01G420700.1 | Wheat | extracellular | 60.44 | 62.96 |
| TraesCS6B01G421200.1 | Wheat | extracellular | 60.44 | 62.96 |
| TraesCS6B01G420800.1 | Wheat | extracellular | 59.56 | 62.04 |
| TraesCS1B01G098000.1 | Wheat | extracellular | 59.11 | 58.85 |
| TraesCS4B01G033500.1 | Wheat | cytosol | 27.11 | 47.66 |
| TraesCS3B01G282500.1 | Wheat | extracellular | 47.11 | 47.32 |
| TraesCS4B01G033100.1 | Wheat | extracellular, vacuole | 47.11 | 47.32 |
| TraesCS3B01G282400.1 | Wheat | extracellular, vacuole | 47.11 | 47.32 |
| TraesCS4B01G033300.1 | Wheat | extracellular | 46.67 | 46.88 |
| TraesCS4B01G033600.1 | Wheat | extracellular, unclear | 46.22 | 46.43 |
| TraesCS4B01G033400.1 | Wheat | extracellular | 46.67 | 45.26 |
| TraesCS4B01G033200.1 | Wheat | extracellular, vacuole | 44.0 | 44.2 |
| TraesCS3B01G285200.1 | Wheat | extracellular | 43.56 | 44.14 |
| TraesCS5B01G462200.1 | Wheat | extracellular, vacuole | 44.89 | 43.91 |
| TraesCS3B01G282300.1 | Wheat | extracellular | 39.56 | 43.41 |
| TraesCS2B01G127000.1 | Wheat | extracellular, vacuole | 36.89 | 40.89 |
| TraesCS2B01G090300.1 | Wheat | extracellular | 37.78 | 40.09 |
| TraesCS2B01G616500.1 | Wheat | extracellular | 38.67 | 40.09 |
| TraesCS7B01G084000.1 | Wheat | plastid | 37.33 | 39.62 |
| TraesCS6B01G041100.1 | Wheat | extracellular | 39.56 | 39.04 |
| TraesCS4B01G294100.1 | Wheat | extracellular | 34.67 | 34.98 |
Protein Annotations
| Gene3D:2.60.120.10 | MapMan:35.1 | InterPro:Cupin_1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0030145 |
| GO:GO:0045735 | InterPro:Germin | InterPro:Germin_Mn-BS | InterPro:IPR014710 | PFAM:PF00190 | PRINTS:PR00325 |
| ScanProsite:PS00725 | PANTHER:PTHR31238 | PANTHER:PTHR31238:SF28 | InterPro:RmlC-like_jellyroll | InterPro:RmlC_Cupin_sf | SMART:SM00835 |
| SUPFAM:SSF51182 | SignalP:SignalP-noTM | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3B01G544200 | EnsemblPlants:TraesCS3B01G544200.1 | SEG:seg |
Description
No Description!
Coordinates
chr3B:-:781493945..781494863
Molecular Weight (calculated)
23537.6 Da
IEP (calculated)
7.384
GRAVY (calculated)
0.227
Length
225 amino acids
Sequence
(BLAST)
(BLAST)
001: MAPKQLPTVL LVVCATLLAL APPLLAGDPD MLQDFCVADY KSLDGPLRLN GFPCKRPENV TADDFFSAAL AFPGNTGNPV GSAVTAANVE KLPGLNTLGV
101: SMSRVDYAPW GVNPPHTHPR ATEIIYVLEG SLDVGFVTTA GKLFARTVCK GELFVFPRGL VHYQKNNGGA PAAAISAFNS QLPGTQSLAL AMFAASPPVP
201: TDVLARALQI DGGLVEAIKA KFPPK
101: SMSRVDYAPW GVNPPHTHPR ATEIIYVLEG SLDVGFVTTA GKLFARTVCK GELFVFPRGL VHYQKNNGGA PAAAISAFNS QLPGTQSLAL AMFAASPPVP
201: TDVLARALQI DGGLVEAIKA KFPPK
001: MMNSRISIII ALSCIMITSI RAYDPDALQD LCVADKSHGT KLNGFPCKET LNITESDFFF AGISKPAVIN STMGSAVTGA NVEKIPGLNT LSVSLARIDY
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
101: APGGLNPPHT HPRATEVVYV LEGELEVGFI TTANKLFTKT IKIGEVFVFP RGLVHFQKNN GKSPASVLSA FNSQLPGTAS VAATLFAAEP ALPEDVLTKT
201: FQVGSKMVDK IKERLATKK
Arabidopsis Description
GL22Germin-like protein subfamily 2 member 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ27]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.