Factsheet for TraesCS3B01G282300.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4A01G181800.1	Wheat	extracellular	77.07	90.8
HORVU4Hr1G005380.1	Barley	extracellular	88.29	80.8
TraesCS4B01G033600.1	Wheat	extracellular, unclear	87.8	80.36
TraesCS4B01G033300.1	Wheat	extracellular	87.8	80.36
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	87.32	79.91
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	87.32	79.91
TraesCS3B01G282500.1	Wheat	extracellular	86.83	79.46
TraesCS4B01G033400.1	Wheat	extracellular	87.8	77.59
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	80.98	74.11
TraesCS4B01G033500.1	Wheat	cytosol	44.39	71.09
Os03t0694000-01	Rice	extracellular	72.68	65.07
Os03t0693800-00	Rice	extracellular	71.71	64.19
EER91050	Sorghum	extracellular	69.76	63.56
Os03t0693900-00	Rice	extracellular	70.24	63.44
Os03t0693700-01	Rice	extracellular, plasma membrane, vacuole	68.78	62.11
Zm00001d033583_P001	Maize	extracellular	67.8	61.78
GSMUA_Achr4P17250_001	Banana	extracellular	41.95	47.51
GSMUA_AchrUn_...	Banana	extracellular	34.63	44.38
TraesCS6B01G422100.1	Wheat	extracellular	44.39	42.13
TraesCS6B01G422000.1	Wheat	extracellular	43.9	41.67
TraesCS3B01G543600.1	Wheat	extracellular	45.37	41.52
TraesCS3B01G543800.1	Wheat	extracellular	45.37	41.33
TraesCS3B01G543700.1	Wheat	extracellular	44.88	40.89
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	37.07	40.43
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	44.88	40.0
TraesCS3B01G544000.1	Wheat	extracellular	44.39	39.74
TraesCS3B01G544200.1	Wheat	extracellular	43.41	39.56
TraesCS1B01G098000.1	Wheat	extracellular	43.41	39.38
TraesCS6B01G421200.1	Wheat	extracellular	41.46	39.35
TraesCS6B01G420700.1	Wheat	extracellular	41.46	39.35
TraesCS6B01G420800.1	Wheat	extracellular	40.98	38.89
TraesCS3B01G200200.1	Wheat	extracellular	41.46	38.64
TraesCS3B01G285200.1	Wheat	extracellular	39.02	36.04
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	34.63	34.98
TraesCS7B01G084000.1	Wheat	plastid	33.17	32.08
TraesCS2B01G090300.1	Wheat	extracellular	32.2	31.13
TraesCS6B01G041100.1	Wheat	extracellular	33.66	30.26
TraesCS2B01G616500.1	Wheat	extracellular	30.73	29.03
TraesCS4B01G294100.1	Wheat	extracellular	31.22	28.7

Protein Annotations

EnsemblPlants:TraesCS3B01G282300.1	EnsemblPlantsGene:TraesCS3B01G282300	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:IPR014710	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf
PANTHER:PTHR31238	PANTHER:PTHR31238:SF26	PFAM:PF00190	PRINTS:PR00325	SEG:seg	SignalP:SignalP-noTM
SMART:SM00835	SUPFAM:SSF51182	TMHMM:TMhelix	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr3B:-:452716051..452717083

Molecular Weight (calculated)

21854.3 Da

IEP (calculated)

6.507

GRAVY (calculated)

0.016

Length

205 amino acids

Sequence
(BLAST)

001: MGYSKTLAAG LFAMLFLAPA VLATDPDPLQ DFCVADLDGK AVSVNGHPCK PMSEDGDDFL FSSKLAKAGN TSTPNGSTVT ELDVAEWPGT NTLGVSMNRV
101: DFALGGHQPA AHPSPCHRDR HRDERVVRAG ETFLIPRGLM HFQFNVGKTE ASMVVSFNSQ NPGIVFVPLM LFGSNPPIPT PVLTKALRVE AGVVELLKSK
201: FAAGF

Best Arabidopsis Sequence Match ( AT1G18970.1 )
(BLAST)

001: MATLQIPSAL LRSFLLMFCL FVIPSLSSDS DPLQDFCVGD LKASASINGF PCKSAVSASD FFYSGLGGPL DTSNPNGVTV APANVLTFPG LNTLGISMNN
101: VELAPGGVNP PHLHPRATEV GTVIEGSVFV GFLSTNNTLF SKVLNAGEAF VIPRGLVHFQ WNVGQVKARM ITAFNSQLPG AVVLPSTLFG SKPEIPNAVL
201: TRAFRTDDTT VQNLKSKFAV

Arabidopsis Description

GLP1Germin-like protein subfamily T member 1 [Source:UniProtKB/Swiss-Prot;Acc:P92995]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.