Factsheet for TraesCS7B01G084000.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

plastid: 22160430
plastid: 22736107

msms PMID: 22736107 doi

AH Kamal, K Cho, DE Kim, N Uozumi, KY Chung, SY Lee, JS Choi, SW Cho, CS Shin, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk 361-763, Korea.

msms PMID: 22160430 doi

AH Kamal, K Cho, S Komatsu, N Uozumi, JS Choi, SH Woo

Department of Crop Science, Chungbuk National University, 410 Seongbong-ro, Heungdeok-gu, Cheongju, Chungbuk, 361-763, Korea.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	97.64	97.64
HORVU7Hr1G036720.1	Barley	extracellular	97.17	97.17
TraesCS7A01G178300.1	Wheat	extracellular	96.7	96.7
TraesCS2B01G090300.1	Wheat	extracellular	93.87	93.87
Os08t0460000-01	Rice	extracellular	90.09	89.67
Zm00001d037513_P001	Maize	plastid	83.02	83.02
EES17780	Sorghum	extracellular, vacuole	80.66	77.38
KRH02617	Soybean	nucleus	63.21	64.42
VIT_11s0016g01220.t01	Wine grape	extracellular	62.26	63.46
TraesCS2B01G616500.1	Wheat	extracellular	63.21	61.75
KRH06186	Soybean	extracellular, vacuole	60.38	61.24
Solyc07g041720.1.1	Tomato	nucleus, plastid	60.38	60.66
KRH47600	Soybean	extracellular	59.43	60.29
PGSC0003DMT400033858	Potato	extracellular	59.91	60.19
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	59.91	60.19
CDY51841	Canola	extracellular, plasma membrane, vacuole	59.91	60.19
VIT_18s0086g00590.t01	Wine grape	cytosol	34.91	60.16
PGSC0003DMT400036428	Potato	extracellular	58.96	60.1
PGSC0003DMT400030317	Potato	extracellular	58.96	60.1
KRH12528	Soybean	extracellular	60.38	60.09
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	72.17	59.77
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	59.43	59.72
CDY45080	Canola	extracellular, plasma membrane, vacuole	59.43	59.72
AT1G72610.1	Thale cress	extracellular, vacuole	58.49	59.62
GSMUA_Achr2P18710_001	Banana	extracellular	70.28	59.6
CDY11164	Canola	extracellular, vacuole	58.02	59.42
CDX68260	Canola	extracellular, vacuole	58.02	59.42
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	58.96	59.24
CDX70935	Canola	extracellular, vacuole	58.96	59.24
VIT_09s0002g01320.t01	Wine grape	extracellular	58.02	58.85
VIT_18s0086g00410.t01	Wine grape	extracellular	58.02	58.85
Solyc03g123410.1.1	Tomato	nucleus	57.55	58.65
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	27.36	58.59
Bra003874.1-P	Field mustard	extracellular	57.08	58.45
Bra002316.1-P	Field mustard	extracellular	58.02	58.29
CDX85429	Canola	extracellular	58.02	58.29
CDX92448	Canola	extracellular	58.02	58.29
CDY16549	Canola	extracellular	58.02	58.29
CDY22866	Canola	extracellular	58.02	58.29
CDX72929	Canola	vacuole	56.13	54.84
KRH19305	Soybean	cytosol, extracellular, plastid	55.66	54.38
Bra020115.1-P	Field mustard	extracellular	54.25	54.25
CDY27880	Canola	extracellular	54.25	54.25
CDY45077	Canola	extracellular	54.25	54.25
CDX96421	Canola	vacuole	55.19	53.92
Bra016047.1-P	Field mustard	vacuole	55.19	53.92
VIT_07s0005g05920.t01	Wine grape	extracellular	51.89	52.63
VIT_07s0005g05930.t01	Wine grape	extracellular	50.94	51.67
VIT_07s0005g05910.t01	Wine grape	extracellular	50.94	51.67
Bra020114.1-P	Field mustard	extracellular, vacuole	53.3	51.6
CDY45079	Canola	extracellular, vacuole	53.3	51.6
VIT_12s0059g00740.t01	Wine grape	cytosol	29.72	51.22
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	51.89	44.35
TraesCS6B01G421300.1	Wheat	cytosol, extracellular, plastid	37.74	42.55
TraesCS6B01G420800.1	Wheat	extracellular	42.45	41.67
TraesCS6B01G421200.1	Wheat	extracellular	42.45	41.67
TraesCS6B01G422000.1	Wheat	extracellular	41.51	40.74
TraesCS6B01G422100.1	Wheat	extracellular	41.04	40.28
TraesCS1B01G098000.1	Wheat	extracellular	41.98	39.38
TraesCS6B01G420700.1	Wheat	extracellular	40.09	39.35
TraesCS3B01G543700.1	Wheat	extracellular	40.09	37.78
TraesCS3B01G543800.1	Wheat	extracellular	39.62	37.33
TraesCS3B01G544200.1	Wheat	extracellular	39.62	37.33
TraesCS3B01G543600.1	Wheat	extracellular	39.15	37.05
TraesCS3B01G285200.1	Wheat	extracellular	38.68	36.94
TraesCS3B01G544000.1	Wheat	extracellular	39.62	36.68
TraesCS3B01G200200.1	Wheat	extracellular	37.74	36.36
TraesCS3B01G282500.1	Wheat	extracellular	37.26	35.27
TraesCS3B01G282400.1	Wheat	extracellular, vacuole	37.26	35.27
TraesCS4B01G033100.1	Wheat	extracellular, vacuole	37.26	35.27
TraesCS4B01G033300.1	Wheat	extracellular	36.79	34.82
TraesCS5B01G462200.1	Wheat	extracellular, vacuole	37.74	34.78
TraesCS2B01G127000.1	Wheat	extracellular, vacuole	33.02	34.48
CDX82141	Canola	vacuole	35.85	34.39
TraesCS4B01G033500.1	Wheat	cytosol	20.75	34.38
TraesCS4B01G033400.1	Wheat	extracellular	37.26	34.05
TraesCS4B01G033600.1	Wheat	extracellular, unclear	35.85	33.93
TraesCS4B01G033200.1	Wheat	extracellular, vacuole	35.85	33.93
TraesCS3B01G282300.1	Wheat	extracellular	32.08	33.17
TraesCS4B01G294100.1	Wheat	extracellular	33.49	31.84
TraesCS6B01G041100.1	Wheat	extracellular	33.49	31.14

Protein Annotations

EnsemblPlants:TraesCS7B01G084000.1	EnsemblPlantsGene:TraesCS7B01G084000	Gene3D:2.60.120.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0030145
GO:GO:0045735	InterPro:Cupin_1	InterPro:Germin	InterPro:Germin_Mn-BS	InterPro:IPR014710	InterPro:RmlC-like_jellyroll
InterPro:RmlC_Cupin_sf	PANTHER:PTHR31238	PANTHER:PTHR31238:SF2	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
SignalP:SignalP-noTM	SMART:SM00835	SUPFAM:SSF51182	MapMan:35.1	:	:

Description

No Description!

Coordinates

chr7B:-:94630073..94630711

Molecular Weight (calculated)

21846.4 Da

IEP (calculated)

6.069

GRAVY (calculated)

0.500

Length

212 amino acids

Sequence
(BLAST)

001: MANAMLLPVL ISFLIMPFSA MALTQDFCVA DLSCSDTPAG YPCKAGVSAG DFYYHGLAAA GNTSNLIKAA VTPAFVGQFP GVNGLGISAA RLDIAMGGVV
101: PLHTHPAASE LLFVTEGTIL AGFISSSSNT VYTKTLYKGD IMVFPQGLLH YQYNGGSSAA VALVAFSGPN PGLQITDYAL FANNLPSAVV EKVTFLDDAQ
201: VKKLKSVLGG SG

Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)

001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG

Arabidopsis Description

GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.