Factsheet for VIT_18s0086g00410.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 6
vacuole 6
plasma membrane 5
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
BaCelLo:	secretory
EpiLoc:	endoplasmic reticulum
iPSORT:	secretory
MultiLoc:	vacuole
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_09s0002g01320.t01	Wine grape	extracellular	93.3	93.3
VIT_18s0086g00590.t01	Wine grape	cytosol	54.07	91.87
VIT_12s0059g00740.t01	Wine grape	cytosol	45.93	78.05
VIT_07s0005g05930.t01	Wine grape	extracellular	77.51	77.51
VIT_07s0005g05910.t01	Wine grape	extracellular	77.51	77.51
VIT_07s0005g05920.t01	Wine grape	extracellular	77.03	77.03
VIT_09s0002g01330.t01	Wine grape	cytosol, extracellular, nucleus	32.54	68.69
VIT_11s0016g01220.t01	Wine grape	extracellular	64.11	64.42
Solyc03g123410.1.1	Tomato	nucleus	59.81	60.1
Bra020113.1-P	Field mustard	extracellular, plasma membrane, vacuole	60.29	59.72
CDY45080	Canola	extracellular, plasma membrane, vacuole	60.29	59.72
PGSC0003DMT400036428	Potato	extracellular	59.33	59.62
Bra006567.1-P	Field mustard	extracellular, plasma membrane, vacuole	59.81	59.24
CDY51841	Canola	extracellular, plasma membrane, vacuole	59.81	59.24
Os08t0460000-01	Rice	extracellular	60.29	59.15
HORVU7Hr1G036720.1	Barley	extracellular	59.81	58.96
CDX70935	Canola	extracellular, vacuole	59.33	58.77
TraesCS7A01G178300.1	Wheat	extracellular	59.33	58.49
Bra002316.1-P	Field mustard	extracellular	58.85	58.29
CDX85429	Canola	extracellular	58.85	58.29
CDX92448	Canola	extracellular	58.85	58.29
CDY16549	Canola	extracellular	58.85	58.29
CDY22866	Canola	extracellular	58.85	58.29
PGSC0003DMT400030317	Potato	extracellular	57.89	58.17
TraesCS7B01G084000.1	Wheat	plastid	58.85	58.02
TraesCS7D01G180200.1	Wheat	extracellular, vacuole	58.85	58.02
TraesCS2B01G090300.1	Wheat	extracellular	58.37	57.55
TraesCS2D01G073600.1	Wheat	extracellular	56.94	57.21
AT5G20630.1	Thale cress	extracellular, plasma membrane, vacuole	57.42	56.87
TraesCS2D01G073700.1	Wheat	extracellular	57.42	56.6
Zm00001d037513_P001	Maize	plastid	57.42	56.6
TraesCS2A01G075000.1	Wheat	extracellular	56.94	55.87
EES17780	Sorghum	extracellular, vacuole	57.42	54.3
CDY45077	Canola	extracellular	53.59	52.83
Bra020115.1-P	Field mustard	extracellular	53.59	52.83
CDY27880	Canola	extracellular	53.59	52.83
VIT_09s0002g01340.t01	Wine grape	extracellular, vacuole	62.68	52.82
Bra020114.1-P	Field mustard	extracellular, vacuole	55.02	52.51
CDY45079	Canola	extracellular, vacuole	55.02	52.51
GSMUA_Achr2P18710_001	Banana	extracellular	56.94	47.6
GSMUA_Achr9P16110_001	Banana	plasma membrane, plastid, vacuole	57.89	47.27
VIT_14s0060g00120.t01	Wine grape	extracellular	39.71	38.25
VIT_07s0005g02380.t01	Wine grape	extracellular	37.32	35.94
VIT_08s0007g03430.t01	Wine grape	cytosol	33.97	34.98
VIT_01s0026g00970.t01	Wine grape	extracellular	36.36	34.39
VIT_17s0000g05360.t01	Wine grape	endoplasmic reticulum, extracellular	37.32	34.21
VIT_07s0005g02370.t01	Wine grape	extracellular	35.41	34.1

Protein Annotations

EntrezGene:100266519	wikigene:100266519	Gene3D:2.60.120.10	MapMan:35.1	EMBL:AM450983	ProteinID:CAN67670
ProteinID:CAN67670.1	ProteinID:CCB60817	ProteinID:CCB60817.1	InterPro:Cupin_1	UniProt:F6I1K0	EMBL:FN596511
GO:GO:0003674	GO:GO:0005488	GO:GO:0005575	GO:GO:0005576	GO:GO:0005618	GO:GO:0005623
GO:GO:0030145	GO:GO:0030312	GO:GO:0045735	GO:GO:0046872	InterPro:Germin	InterPro:Germin_Mn-BS
InterPro:IPR014710	EntrezGene:LOC100266519	wikigene:LOC100266519	PFAM:PF00190	PRINTS:PR00325	ScanProsite:PS00725
PANTHER:PTHR31238	PANTHER:PTHR31238:SF92	InterPro:RmlC-like_jellyroll	InterPro:RmlC_Cupin_sf	SMART:SM00835	SUPFAM:SSF51182
SignalP:SignalP-noTM	UniParc:UPI0001985659	ArrayExpress:VIT_18s0086g00410	EnsemblPlantsGene:VIT_18s0086g00410	EnsemblPlants:VIT_18s0086g00410.t01	RefSeq:XP_002273384
RefSeq:XP_002273384.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr18:+:17728344..17729060

Molecular Weight (calculated)

21917.3 Da

IEP (calculated)

5.490

GRAVY (calculated)

0.262

Length

209 amino acids

Sequence
(BLAST)

001: MLHILALFSF LLVSSSHAAV QDFCVADLTA PQGPAGYSCK TPAEVTADDF VYSGLSVPGN TSTLFNAAIN TAFVEKFPGL NGLGVSMARA DIAPGGVIPM
101: HTHPGASEII LIAKGSVTAG LISSDNTVYL KTLKEGDIMV FPQGLLHFQV NTGRTQAHLW ASFGSPNPGL QILSNALFSN NLPSELIEKT TFLDDDEVKR
201: LKALLGGSG

Best Arabidopsis Sequence Match ( AT1G72610.1 )
(BLAST)

001: MLRTIFLLSL LFALSNASVQ DFCVANLKRA ETPAGYPCIR PIHVKATDFV FSGLGTPGNT TNIINAAVTP AFAAQFPGLN GLGLSTARLD LAPKGVIPMH
101: THPGASEVLF VLTGSITAGF VSSANAVYVQ TLKPGQVMVF PQGLLHFQIN AGKSSASAVV TFNSANPGLQ ILDFALFANS LPTELVVGTT FLDATTVKKL
201: KGVLGGTG

Arabidopsis Description

GLP1Germin-like protein subfamily 3 member 1 [Source:UniProtKB/Swiss-Prot;Acc:P94040]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.